Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb18Q91Y02 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb18Q91Y02 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.18■□□□□ 0.18
Pcdhb18Q91Y02 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.18■□□□□ 0.18
Pcdhb18Q91Y02 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb18Q91Y02 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb18Q91Y02 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb18Q91Y02 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb18Q91Y02 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.18■□□□□ 0.18
Pcdhb18Q91Y02 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.18■□□□□ 0.18
Pcdhb18Q91Y02 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.18■□□□□ 0.18
Pcdhb18Q91Y02 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Pcdhb18Q91Y02 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Pcdhb18Q91Y02 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Pcdhb18Q91Y02 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb18Q91Y02 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb18Q91Y02 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb18Q91Y02 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb18Q91Y02 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb18Q91Y02 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Pcdhb18Q91Y02 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb18Q91Y02 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb18Q91Y02 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb18Q91Y02 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb18Q91Y02 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb18Q91Y02 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb18Q91Y02 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb18Q91Y02 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.18■□□□□ 0.18
Pcdhb18Q91Y02 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb18Q91Y02 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb18Q91Y02 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb18Q91Y02 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Pcdhb18Q91Y02 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb18Q91Y02 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb18Q91Y02 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb18Q91Y02 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb18Q91Y02 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb18Q91Y02 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb18Q91Y02 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Pcdhb18Q91Y02 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb18Q91Y02 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb18Q91Y02 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb18Q91Y02 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb18Q91Y02 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb18Q91Y02 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.17■□□□□ 0.18
Pcdhb18Q91Y02 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb18Q91Y02 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.17■□□□□ 0.18
Pcdhb18Q91Y02 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.17■□□□□ 0.18
Pcdhb18Q91Y02 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Pcdhb18Q91Y02 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb18Q91Y02 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb18Q91Y02 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb18Q91Y02 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb18Q91Y02 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb18Q91Y02 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb18Q91Y02 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC16.17■□□□□ 0.18
Pcdhb18Q91Y02 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb18Q91Y02 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb18Q91Y02 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb18Q91Y02 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Pcdhb18Q91Y02 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb18Q91Y02 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb18Q91Y02 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb18Q91Y02 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb18Q91Y02 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb18Q91Y02 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb18Q91Y02 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdhb18Q91Y02 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb18Q91Y02 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb18Q91Y02 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb18Q91Y02 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Pcdhb18Q91Y02 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb18Q91Y02 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Pcdhb18Q91Y02 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdhb18Q91Y02 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb18Q91Y02 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb18Q91Y02 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Pcdhb18Q91Y02 Gm11025-201ENSMUST00000140773 466 ntBASIC16.16■□□□□ 0.18
Pcdhb18Q91Y02 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb18Q91Y02 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb18Q91Y02 Gm10576-201ENSMUST00000191927 825 ntBASIC16.16■□□□□ 0.18
Pcdhb18Q91Y02 Gm44492-201ENSMUST00000197012 141 ntBASIC16.16■□□□□ 0.18
Pcdhb18Q91Y02 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Pcdhb18Q91Y02 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb18Q91Y02 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdhb18Q91Y02 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb18Q91Y02 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb18Q91Y02 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Pcdhb18Q91Y02 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb18Q91Y02 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb18Q91Y02 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb18Q91Y02 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb18Q91Y02 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Pcdhb18Q91Y02 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb18Q91Y02 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.16■□□□□ 0.18
Pcdhb18Q91Y02 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb18Q91Y02 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb18Q91Y02 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb18Q91Y02 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb18Q91Y02 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms