Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb20Q91XZ9 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC15.04■□□□□ -0
Pcdhb20Q91XZ9 Gm14005-208ENSMUST00000223654 681 ntBASIC15.04■□□□□ -0
Pcdhb20Q91XZ9 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
Pcdhb20Q91XZ9 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb20Q91XZ9 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb20Q91XZ9 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb20Q91XZ9 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb20Q91XZ9 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb20Q91XZ9 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb20Q91XZ9 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb20Q91XZ9 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
Pcdhb20Q91XZ9 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Pcdhb20Q91XZ9 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb20Q91XZ9 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.04■□□□□ -0
Pcdhb20Q91XZ9 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.04■□□□□ -0
Pcdhb20Q91XZ9 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb20Q91XZ9 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb20Q91XZ9 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb20Q91XZ9 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Pcdhb20Q91XZ9 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Pcdhb20Q91XZ9 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb20Q91XZ9 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb20Q91XZ9 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.03■□□□□ -0
Pcdhb20Q91XZ9 4833412K13Rik-201ENSMUST00000195509 1479 ntBASIC15.03■□□□□ -0
Pcdhb20Q91XZ9 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb20Q91XZ9 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Pcdhb20Q91XZ9 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb20Q91XZ9 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb20Q91XZ9 Nrxn1-214ENSMUST00000173222 859 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb20Q91XZ9 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.03■□□□□ -0
Pcdhb20Q91XZ9 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Pcdhb20Q91XZ9 Pinx1-201ENSMUST00000022528 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb20Q91XZ9 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb20Q91XZ9 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.03■□□□□ -0
Pcdhb20Q91XZ9 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb20Q91XZ9 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb20Q91XZ9 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb20Q91XZ9 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Pcdhb20Q91XZ9 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb20Q91XZ9 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb20Q91XZ9 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb20Q91XZ9 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.03■□□□□ -0
Pcdhb20Q91XZ9 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb20Q91XZ9 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb20Q91XZ9 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb20Q91XZ9 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Pcdhb20Q91XZ9 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb20Q91XZ9 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb20Q91XZ9 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb20Q91XZ9 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb20Q91XZ9 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb20Q91XZ9 Gm37437-201ENSMUST00000194451 1937 ntBASIC15.02■□□□□ -0
Pcdhb20Q91XZ9 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb20Q91XZ9 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb20Q91XZ9 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.02■□□□□ -0
Pcdhb20Q91XZ9 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb20Q91XZ9 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb20Q91XZ9 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb20Q91XZ9 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb20Q91XZ9 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb20Q91XZ9 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb20Q91XZ9 Gm13255-201ENSMUST00000117255 547 ntBASIC15.02■□□□□ -0
Pcdhb20Q91XZ9 Gm15358-201ENSMUST00000119249 520 ntBASIC15.02■□□□□ -0
Pcdhb20Q91XZ9 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.02■□□□□ -0
Pcdhb20Q91XZ9 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb20Q91XZ9 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.02■□□□□ -0
Pcdhb20Q91XZ9 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb20Q91XZ9 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb20Q91XZ9 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb20Q91XZ9 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.02□□□□□ -0.01
Pcdhb20Q91XZ9 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Pcdhb20Q91XZ9 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Pcdhb20Q91XZ9 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb20Q91XZ9 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb20Q91XZ9 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb20Q91XZ9 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Pcdhb20Q91XZ9 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.02□□□□□ -0.01
Pcdhb20Q91XZ9 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.02□□□□□ -0.01
Pcdhb20Q91XZ9 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb20Q91XZ9 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.02□□□□□ -0.01
Pcdhb20Q91XZ9 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb20Q91XZ9 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb20Q91XZ9 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Pcdhb20Q91XZ9 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb20Q91XZ9 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb20Q91XZ9 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb20Q91XZ9 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb20Q91XZ9 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb20Q91XZ9 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb20Q91XZ9 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Pcdhb20Q91XZ9 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb20Q91XZ9 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb20Q91XZ9 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.01□□□□□ -0.01
Pcdhb20Q91XZ9 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb20Q91XZ9 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.01□□□□□ -0.01
Pcdhb20Q91XZ9 Bud31-206ENSMUST00000162308 705 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb20Q91XZ9 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.01□□□□□ -0.01
Pcdhb20Q91XZ9 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Pcdhb20Q91XZ9 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms