Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb22Q91XZ8 Gm2651-201ENSMUST00000203560 838 ntBASIC18.05■□□□□ 0.48
Pcdhb22Q91XZ8 AC151836.1-202ENSMUST00000226259 753 ntBASIC18.05■□□□□ 0.48
Pcdhb22Q91XZ8 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb22Q91XZ8 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb22Q91XZ8 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb22Q91XZ8 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb22Q91XZ8 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb22Q91XZ8 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb22Q91XZ8 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb22Q91XZ8 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb22Q91XZ8 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb22Q91XZ8 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb22Q91XZ8 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb22Q91XZ8 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb22Q91XZ8 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb22Q91XZ8 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb22Q91XZ8 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Pcdhb22Q91XZ8 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb22Q91XZ8 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Pcdhb22Q91XZ8 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb22Q91XZ8 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC18.04■□□□□ 0.48
Pcdhb22Q91XZ8 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Pcdhb22Q91XZ8 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.04■□□□□ 0.48
Pcdhb22Q91XZ8 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC18.04■□□□□ 0.48
Pcdhb22Q91XZ8 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb22Q91XZ8 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.04■□□□□ 0.48
Pcdhb22Q91XZ8 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Pcdhb22Q91XZ8 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb22Q91XZ8 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC18.04■□□□□ 0.48
Pcdhb22Q91XZ8 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb22Q91XZ8 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb22Q91XZ8 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb22Q91XZ8 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Pcdhb22Q91XZ8 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb22Q91XZ8 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb22Q91XZ8 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Pcdhb22Q91XZ8 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Pcdhb22Q91XZ8 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb22Q91XZ8 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb22Q91XZ8 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb22Q91XZ8 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb22Q91XZ8 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb22Q91XZ8 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb22Q91XZ8 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC18.03■□□□□ 0.48
Pcdhb22Q91XZ8 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb22Q91XZ8 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb22Q91XZ8 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC18.03■□□□□ 0.48
Pcdhb22Q91XZ8 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Pcdhb22Q91XZ8 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb22Q91XZ8 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb22Q91XZ8 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.03■□□□□ 0.48
Pcdhb22Q91XZ8 Gm6184-201ENSMUST00000120403 1261 ntBASIC18.03■□□□□ 0.48
Pcdhb22Q91XZ8 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC18.03■□□□□ 0.48
Pcdhb22Q91XZ8 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC18.03■□□□□ 0.48
Pcdhb22Q91XZ8 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb22Q91XZ8 Gm18733-201ENSMUST00000173950 856 ntBASIC18.03■□□□□ 0.48
Pcdhb22Q91XZ8 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Pcdhb22Q91XZ8 AC147366.1-201ENSMUST00000227671 852 ntBASIC18.03■□□□□ 0.48
Pcdhb22Q91XZ8 Gm15590-201ENSMUST00000078419 552 ntBASIC18.03■□□□□ 0.48
Pcdhb22Q91XZ8 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Pcdhb22Q91XZ8 Gm7901-201ENSMUST00000120430 1597 ntBASIC18.03■□□□□ 0.48
Pcdhb22Q91XZ8 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb22Q91XZ8 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb22Q91XZ8 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb22Q91XZ8 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC18.03■□□□□ 0.48
Pcdhb22Q91XZ8 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC18.03■□□□□ 0.48
Pcdhb22Q91XZ8 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb22Q91XZ8 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb22Q91XZ8 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb22Q91XZ8 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb22Q91XZ8 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb22Q91XZ8 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb22Q91XZ8 Gm11453-201ENSMUST00000117318 1007 ntBASIC18.02■□□□□ 0.48
Pcdhb22Q91XZ8 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.02■□□□□ 0.48
Pcdhb22Q91XZ8 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC18.02■□□□□ 0.48
Pcdhb22Q91XZ8 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC18.02■□□□□ 0.48
Pcdhb22Q91XZ8 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC18.02■□□□□ 0.48
Pcdhb22Q91XZ8 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC18.02■□□□□ 0.48
Pcdhb22Q91XZ8 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb22Q91XZ8 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb22Q91XZ8 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb22Q91XZ8 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhb22Q91XZ8 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhb22Q91XZ8 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhb22Q91XZ8 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhb22Q91XZ8 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Pcdhb22Q91XZ8 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb22Q91XZ8 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC18.01■□□□□ 0.47
Pcdhb22Q91XZ8 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Pcdhb22Q91XZ8 Gm45167-201ENSMUST00000208007 322 ntBASIC18.01■□□□□ 0.47
Pcdhb22Q91XZ8 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb22Q91XZ8 AC138767.1-201ENSMUST00000222661 415 ntBASIC18.01■□□□□ 0.47
Pcdhb22Q91XZ8 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb22Q91XZ8 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Pcdhb22Q91XZ8 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb22Q91XZ8 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb22Q91XZ8 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb22Q91XZ8 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb22Q91XZ8 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms