Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga4Q91XY4 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.26■□□□□ 0.03
Pcdhga4Q91XY4 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.26■□□□□ 0.03
Pcdhga4Q91XY4 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga4Q91XY4 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Pcdhga4Q91XY4 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
Pcdhga4Q91XY4 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga4Q91XY4 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
Pcdhga4Q91XY4 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.26■□□□□ 0.03
Pcdhga4Q91XY4 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.26■□□□□ 0.03
Pcdhga4Q91XY4 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga4Q91XY4 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Pcdhga4Q91XY4 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga4Q91XY4 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga4Q91XY4 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Pcdhga4Q91XY4 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga4Q91XY4 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga4Q91XY4 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga4Q91XY4 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga4Q91XY4 Prob1-201ENSMUST00000097619 3021 ntBASIC15.26■□□□□ 0.03
Pcdhga4Q91XY4 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga4Q91XY4 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Pcdhga4Q91XY4 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Pcdhga4Q91XY4 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga4Q91XY4 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga4Q91XY4 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.26■□□□□ 0.03
Pcdhga4Q91XY4 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga4Q91XY4 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga4Q91XY4 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga4Q91XY4 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhga4Q91XY4 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga4Q91XY4 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga4Q91XY4 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga4Q91XY4 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga4Q91XY4 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga4Q91XY4 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga4Q91XY4 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga4Q91XY4 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga4Q91XY4 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga4Q91XY4 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhga4Q91XY4 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga4Q91XY4 Gm4459-201ENSMUST00000118750 468 ntBASIC15.25■□□□□ 0.03
Pcdhga4Q91XY4 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.25■□□□□ 0.03
Pcdhga4Q91XY4 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga4Q91XY4 Gm4535-201ENSMUST00000182274 558 ntBASIC15.25■□□□□ 0.03
Pcdhga4Q91XY4 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga4Q91XY4 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga4Q91XY4 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Pcdhga4Q91XY4 Gm10355-201ENSMUST00000097146 517 ntBASIC15.25■□□□□ 0.03
Pcdhga4Q91XY4 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga4Q91XY4 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga4Q91XY4 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga4Q91XY4 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga4Q91XY4 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga4Q91XY4 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga4Q91XY4 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga4Q91XY4 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga4Q91XY4 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga4Q91XY4 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga4Q91XY4 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga4Q91XY4 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga4Q91XY4 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga4Q91XY4 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga4Q91XY4 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga4Q91XY4 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga4Q91XY4 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhga4Q91XY4 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdhga4Q91XY4 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdhga4Q91XY4 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga4Q91XY4 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga4Q91XY4 Gm11452-201ENSMUST00000122376 690 ntBASIC15.24■□□□□ 0.03
Pcdhga4Q91XY4 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.24■□□□□ 0.03
Pcdhga4Q91XY4 Gm18733-201ENSMUST00000173950 856 ntBASIC15.24■□□□□ 0.03
Pcdhga4Q91XY4 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhga4Q91XY4 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.24■□□□□ 0.03
Pcdhga4Q91XY4 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.24■□□□□ 0.03
Pcdhga4Q91XY4 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.24■□□□□ 0.03
Pcdhga4Q91XY4 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga4Q91XY4 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga4Q91XY4 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga4Q91XY4 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga4Q91XY4 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.24■□□□□ 0.03
Pcdhga4Q91XY4 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga4Q91XY4 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga4Q91XY4 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga4Q91XY4 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga4Q91XY4 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhga4Q91XY4 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhga4Q91XY4 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga4Q91XY4 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhga4Q91XY4 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.23■□□□□ 0.03
Pcdhga4Q91XY4 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga4Q91XY4 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga4Q91XY4 Sybu-209ENSMUST00000228639 4113 ntBASIC15.23■□□□□ 0.03
Pcdhga4Q91XY4 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhga4Q91XY4 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga4Q91XY4 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga4Q91XY4 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga4Q91XY4 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga4Q91XY4 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms