Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vsx1Q91V10 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vsx1Q91V10 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vsx1Q91V10 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Vsx1Q91V10 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.29■□□□□ 0.04
Vsx1Q91V10 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vsx1Q91V10 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Vsx1Q91V10 Mir449b-201ENSMUST00000104833 80 ntBASIC15.29■□□□□ 0.04
Vsx1Q91V10 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Vsx1Q91V10 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.29■□□□□ 0.04
Vsx1Q91V10 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.29■□□□□ 0.04
Vsx1Q91V10 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC15.29■□□□□ 0.04
Vsx1Q91V10 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Vsx1Q91V10 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.29■□□□□ 0.04
Vsx1Q91V10 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.29■□□□□ 0.04
Vsx1Q91V10 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vsx1Q91V10 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Vsx1Q91V10 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vsx1Q91V10 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vsx1Q91V10 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vsx1Q91V10 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Vsx1Q91V10 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vsx1Q91V10 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Vsx1Q91V10 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vsx1Q91V10 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vsx1Q91V10 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vsx1Q91V10 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vsx1Q91V10 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vsx1Q91V10 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vsx1Q91V10 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Vsx1Q91V10 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vsx1Q91V10 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Vsx1Q91V10 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vsx1Q91V10 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vsx1Q91V10 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vsx1Q91V10 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Vsx1Q91V10 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vsx1Q91V10 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Vsx1Q91V10 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Vsx1Q91V10 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC15.28■□□□□ 0.04
Vsx1Q91V10 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.28■□□□□ 0.04
Vsx1Q91V10 Gm18489-201ENSMUST00000172565 551 ntBASIC15.28■□□□□ 0.04
Vsx1Q91V10 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.28■□□□□ 0.04
Vsx1Q91V10 Gm27622-201ENSMUST00000183779 60 ntBASIC15.28■□□□□ 0.04
Vsx1Q91V10 Mir6977-201ENSMUST00000184960 64 ntBASIC15.28■□□□□ 0.04
Vsx1Q91V10 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Vsx1Q91V10 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vsx1Q91V10 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vsx1Q91V10 Hist1h2al-201ENSMUST00000091708 339 ntBASIC15.28■□□□□ 0.04
Vsx1Q91V10 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vsx1Q91V10 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vsx1Q91V10 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vsx1Q91V10 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vsx1Q91V10 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.27■□□□□ 0.04
Vsx1Q91V10 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Vsx1Q91V10 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.27■□□□□ 0.04
Vsx1Q91V10 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vsx1Q91V10 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.27■□□□□ 0.04
Vsx1Q91V10 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vsx1Q91V10 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vsx1Q91V10 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vsx1Q91V10 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vsx1Q91V10 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vsx1Q91V10 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.27■□□□□ 0.04
Vsx1Q91V10 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Vsx1Q91V10 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vsx1Q91V10 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vsx1Q91V10 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Vsx1Q91V10 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vsx1Q91V10 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.27■□□□□ 0.04
Vsx1Q91V10 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.27■□□□□ 0.04
Vsx1Q91V10 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.27■□□□□ 0.04
Vsx1Q91V10 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.27■□□□□ 0.04
Vsx1Q91V10 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.27■□□□□ 0.04
Vsx1Q91V10 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.27■□□□□ 0.04
Vsx1Q91V10 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.27■□□□□ 0.04
Vsx1Q91V10 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Vsx1Q91V10 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vsx1Q91V10 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vsx1Q91V10 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vsx1Q91V10 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Vsx1Q91V10 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vsx1Q91V10 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Vsx1Q91V10 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vsx1Q91V10 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Vsx1Q91V10 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vsx1Q91V10 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vsx1Q91V10 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vsx1Q91V10 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vsx1Q91V10 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
Vsx1Q91V10 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vsx1Q91V10 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vsx1Q91V10 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Vsx1Q91V10 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Vsx1Q91V10 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.26■□□□□ 0.03
Vsx1Q91V10 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vsx1Q91V10 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vsx1Q91V10 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
Vsx1Q91V10 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Vsx1Q91V10 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms