Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Gm10290-201ENSMUST00000200451 999 ntBASIC18.23■□□□□ 0.51
StrcQ8VIM6 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
StrcQ8VIM6 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
StrcQ8VIM6 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
StrcQ8VIM6 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
StrcQ8VIM6 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
StrcQ8VIM6 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
StrcQ8VIM6 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
StrcQ8VIM6 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
StrcQ8VIM6 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
StrcQ8VIM6 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
StrcQ8VIM6 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
StrcQ8VIM6 Gm15678-201ENSMUST00000117573 960 ntBASIC18.23■□□□□ 0.51
StrcQ8VIM6 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
StrcQ8VIM6 AC153962.4-201ENSMUST00000217878 242 ntBASIC18.23■□□□□ 0.51
StrcQ8VIM6 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC18.23■□□□□ 0.51
StrcQ8VIM6 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
StrcQ8VIM6 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
StrcQ8VIM6 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
StrcQ8VIM6 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
StrcQ8VIM6 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
StrcQ8VIM6 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
StrcQ8VIM6 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC18.22■□□□□ 0.51
StrcQ8VIM6 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC18.22■□□□□ 0.51
StrcQ8VIM6 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC18.22■□□□□ 0.51
StrcQ8VIM6 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
StrcQ8VIM6 Gm43630-201ENSMUST00000201550 776 ntBASIC18.22■□□□□ 0.51
StrcQ8VIM6 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
StrcQ8VIM6 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
StrcQ8VIM6 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
StrcQ8VIM6 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
StrcQ8VIM6 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
StrcQ8VIM6 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.22■□□□□ 0.51
StrcQ8VIM6 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
StrcQ8VIM6 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.22■□□□□ 0.51
StrcQ8VIM6 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
StrcQ8VIM6 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC18.22■□□□□ 0.51
StrcQ8VIM6 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC18.22■□□□□ 0.51
StrcQ8VIM6 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
StrcQ8VIM6 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
StrcQ8VIM6 Gm15593-201ENSMUST00000122085 1008 ntBASIC18.21■□□□□ 0.51
StrcQ8VIM6 Gm37748-201ENSMUST00000194379 1140 ntBASIC18.21■□□□□ 0.51
StrcQ8VIM6 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC18.21■□□□□ 0.51
StrcQ8VIM6 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
StrcQ8VIM6 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
StrcQ8VIM6 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
StrcQ8VIM6 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
StrcQ8VIM6 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
StrcQ8VIM6 Gm6222-201ENSMUST00000120787 396 ntBASIC18.21■□□□□ 0.51
StrcQ8VIM6 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC18.21■□□□□ 0.51
StrcQ8VIM6 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC18.21■□□□□ 0.51
StrcQ8VIM6 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC18.21■□□□□ 0.51
StrcQ8VIM6 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
StrcQ8VIM6 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
StrcQ8VIM6 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
StrcQ8VIM6 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
StrcQ8VIM6 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
StrcQ8VIM6 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
StrcQ8VIM6 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
StrcQ8VIM6 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
StrcQ8VIM6 Gm8131-201ENSMUST00000213783 1570 ntBASIC18.2■□□□□ 0.5
StrcQ8VIM6 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC18.2■□□□□ 0.5
StrcQ8VIM6 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
StrcQ8VIM6 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
StrcQ8VIM6 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
StrcQ8VIM6 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
StrcQ8VIM6 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
StrcQ8VIM6 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
StrcQ8VIM6 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
StrcQ8VIM6 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
StrcQ8VIM6 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
StrcQ8VIM6 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
StrcQ8VIM6 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
StrcQ8VIM6 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
StrcQ8VIM6 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
StrcQ8VIM6 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC18.19■□□□□ 0.5
StrcQ8VIM6 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC18.19■□□□□ 0.5
StrcQ8VIM6 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
StrcQ8VIM6 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
StrcQ8VIM6 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
StrcQ8VIM6 AC162801.1-201ENSMUST00000220612 198 ntBASIC18.19■□□□□ 0.5
StrcQ8VIM6 AC156016.3-201ENSMUST00000228623 344 ntBASIC18.19■□□□□ 0.5
StrcQ8VIM6 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
StrcQ8VIM6 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
StrcQ8VIM6 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
StrcQ8VIM6 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
StrcQ8VIM6 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
StrcQ8VIM6 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
StrcQ8VIM6 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC18.19■□□□□ 0.5
StrcQ8VIM6 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
StrcQ8VIM6 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
StrcQ8VIM6 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
StrcQ8VIM6 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
StrcQ8VIM6 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC18.19■□□□□ 0.5
StrcQ8VIM6 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
StrcQ8VIM6 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
StrcQ8VIM6 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
StrcQ8VIM6 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
StrcQ8VIM6 Gm5303-201ENSMUST00000117943 1252 ntBASIC18.19■□□□□ 0.5
StrcQ8VIM6 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms