Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.04■□□□□ 0.16
Trim60Q8VI40 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim60Q8VI40 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim60Q8VI40 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim60Q8VI40 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trim60Q8VI40 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim60Q8VI40 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim60Q8VI40 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.04■□□□□ 0.16
Trim60Q8VI40 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim60Q8VI40 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Trim60Q8VI40 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim60Q8VI40 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.04■□□□□ 0.16
Trim60Q8VI40 Gm9172-201ENSMUST00000212092 954 ntBASIC16.04■□□□□ 0.16
Trim60Q8VI40 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.04■□□□□ 0.16
Trim60Q8VI40 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim60Q8VI40 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim60Q8VI40 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim60Q8VI40 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim60Q8VI40 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim60Q8VI40 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim60Q8VI40 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim60Q8VI40 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim60Q8VI40 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim60Q8VI40 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim60Q8VI40 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim60Q8VI40 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim60Q8VI40 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim60Q8VI40 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Trim60Q8VI40 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim60Q8VI40 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.03■□□□□ 0.16
Trim60Q8VI40 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim60Q8VI40 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim60Q8VI40 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.03■□□□□ 0.16
Trim60Q8VI40 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim60Q8VI40 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Trim60Q8VI40 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim60Q8VI40 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim60Q8VI40 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.03■□□□□ 0.16
Trim60Q8VI40 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim60Q8VI40 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim60Q8VI40 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.03■□□□□ 0.16
Trim60Q8VI40 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.03■□□□□ 0.16
Trim60Q8VI40 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.03■□□□□ 0.16
Trim60Q8VI40 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.03■□□□□ 0.16
Trim60Q8VI40 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.03■□□□□ 0.16
Trim60Q8VI40 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Trim60Q8VI40 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.03■□□□□ 0.16
Trim60Q8VI40 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.03■□□□□ 0.16
Trim60Q8VI40 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
Trim60Q8VI40 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.03■□□□□ 0.16
Trim60Q8VI40 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.03■□□□□ 0.16
Trim60Q8VI40 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.03■□□□□ 0.16
Trim60Q8VI40 Gm8825-201ENSMUST00000182565 998 ntBASIC16.03■□□□□ 0.16
Trim60Q8VI40 Gm4518-201ENSMUST00000182638 718 ntBASIC16.03■□□□□ 0.16
Trim60Q8VI40 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.03■□□□□ 0.16
Trim60Q8VI40 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.03■□□□□ 0.16
Trim60Q8VI40 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.03■□□□□ 0.16
Trim60Q8VI40 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Trim60Q8VI40 Gm17808-201ENSMUST00000200859 894 ntBASIC16.03■□□□□ 0.16
Trim60Q8VI40 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.03■□□□□ 0.16
Trim60Q8VI40 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim60Q8VI40 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.03■□□□□ 0.16
Trim60Q8VI40 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim60Q8VI40 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim60Q8VI40 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim60Q8VI40 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim60Q8VI40 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim60Q8VI40 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.03■□□□□ 0.16
Trim60Q8VI40 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim60Q8VI40 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trim60Q8VI40 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Trim60Q8VI40 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim60Q8VI40 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim60Q8VI40 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim60Q8VI40 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim60Q8VI40 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Trim60Q8VI40 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim60Q8VI40 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim60Q8VI40 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim60Q8VI40 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trim60Q8VI40 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.02■□□□□ 0.16
Trim60Q8VI40 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim60Q8VI40 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trim60Q8VI40 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim60Q8VI40 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim60Q8VI40 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.02■□□□□ 0.16
Trim60Q8VI40 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Trim60Q8VI40 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim60Q8VI40 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim60Q8VI40 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim60Q8VI40 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim60Q8VI40 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim60Q8VI40 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim60Q8VI40 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim60Q8VI40 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trim60Q8VI40 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trim60Q8VI40 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim60Q8VI40 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
Trim60Q8VI40 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim60Q8VI40 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms