Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim29Q8R2Q0 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trim29Q8R2Q0 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim29Q8R2Q0 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Trim29Q8R2Q0 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim29Q8R2Q0 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Trim29Q8R2Q0 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim29Q8R2Q0 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim29Q8R2Q0 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim29Q8R2Q0 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim29Q8R2Q0 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim29Q8R2Q0 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.71■□□□□ 0.43
Trim29Q8R2Q0 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim29Q8R2Q0 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim29Q8R2Q0 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim29Q8R2Q0 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Trim29Q8R2Q0 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim29Q8R2Q0 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim29Q8R2Q0 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trim29Q8R2Q0 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim29Q8R2Q0 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim29Q8R2Q0 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17.71■□□□□ 0.43
Trim29Q8R2Q0 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim29Q8R2Q0 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim29Q8R2Q0 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim29Q8R2Q0 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim29Q8R2Q0 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim29Q8R2Q0 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.7■□□□□ 0.42
Trim29Q8R2Q0 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim29Q8R2Q0 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.7■□□□□ 0.42
Trim29Q8R2Q0 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.7■□□□□ 0.42
Trim29Q8R2Q0 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.7■□□□□ 0.42
Trim29Q8R2Q0 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim29Q8R2Q0 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.7■□□□□ 0.42
Trim29Q8R2Q0 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim29Q8R2Q0 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim29Q8R2Q0 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.7■□□□□ 0.42
Trim29Q8R2Q0 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim29Q8R2Q0 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim29Q8R2Q0 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim29Q8R2Q0 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Trim29Q8R2Q0 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Trim29Q8R2Q0 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim29Q8R2Q0 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trim29Q8R2Q0 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim29Q8R2Q0 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trim29Q8R2Q0 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.69■□□□□ 0.42
Trim29Q8R2Q0 Gm9103-201ENSMUST00000119371 405 ntBASIC17.69■□□□□ 0.42
Trim29Q8R2Q0 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim29Q8R2Q0 Gm28033-201ENSMUST00000184224 96 ntBASIC17.69■□□□□ 0.42
Trim29Q8R2Q0 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.69■□□□□ 0.42
Trim29Q8R2Q0 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.69■□□□□ 0.42
Trim29Q8R2Q0 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trim29Q8R2Q0 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim29Q8R2Q0 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim29Q8R2Q0 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.69■□□□□ 0.42
Trim29Q8R2Q0 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim29Q8R2Q0 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim29Q8R2Q0 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim29Q8R2Q0 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim29Q8R2Q0 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim29Q8R2Q0 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim29Q8R2Q0 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim29Q8R2Q0 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim29Q8R2Q0 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim29Q8R2Q0 Gm8097-201ENSMUST00000117903 829 ntBASIC17.68■□□□□ 0.42
Trim29Q8R2Q0 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.68■□□□□ 0.42
Trim29Q8R2Q0 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim29Q8R2Q0 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.68■□□□□ 0.42
Trim29Q8R2Q0 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC17.68■□□□□ 0.42
Trim29Q8R2Q0 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim29Q8R2Q0 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim29Q8R2Q0 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim29Q8R2Q0 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim29Q8R2Q0 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim29Q8R2Q0 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trim29Q8R2Q0 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim29Q8R2Q0 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim29Q8R2Q0 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim29Q8R2Q0 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim29Q8R2Q0 Asic1-205ENSMUST00000228185 1818 ntBASIC17.68■□□□□ 0.42
Trim29Q8R2Q0 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trim29Q8R2Q0 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.67■□□□□ 0.42
Trim29Q8R2Q0 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim29Q8R2Q0 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim29Q8R2Q0 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim29Q8R2Q0 Gm45605-201ENSMUST00000210265 4269 ntBASIC17.67■□□□□ 0.42
Trim29Q8R2Q0 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim29Q8R2Q0 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim29Q8R2Q0 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trim29Q8R2Q0 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Trim29Q8R2Q0 Gm27741-201ENSMUST00000185060 237 ntBASIC17.67■□□□□ 0.42
Trim29Q8R2Q0 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.67■□□□□ 0.42
Trim29Q8R2Q0 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.67■□□□□ 0.42
Trim29Q8R2Q0 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim29Q8R2Q0 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim29Q8R2Q0 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim29Q8R2Q0 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.67■□□□□ 0.42
Trim29Q8R2Q0 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Trim29Q8R2Q0 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms