Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Nudcd3Q8R1N4 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nudcd3Q8R1N4 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nudcd3Q8R1N4 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nudcd3Q8R1N4 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nudcd3Q8R1N4 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Nudcd3Q8R1N4 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nudcd3Q8R1N4 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nudcd3Q8R1N4 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Nudcd3Q8R1N4 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
Nudcd3Q8R1N4 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nudcd3Q8R1N4 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.51■□□□□ 0.07
Nudcd3Q8R1N4 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nudcd3Q8R1N4 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nudcd3Q8R1N4 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Nudcd3Q8R1N4 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Nudcd3Q8R1N4 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nudcd3Q8R1N4 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nudcd3Q8R1N4 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.5■□□□□ 0.07
Nudcd3Q8R1N4 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nudcd3Q8R1N4 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nudcd3Q8R1N4 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Nudcd3Q8R1N4 Gm13559-201ENSMUST00000120476 863 ntBASIC15.5■□□□□ 0.07
Nudcd3Q8R1N4 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.5■□□□□ 0.07
Nudcd3Q8R1N4 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Nudcd3Q8R1N4 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Nudcd3Q8R1N4 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.5■□□□□ 0.07
Nudcd3Q8R1N4 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nudcd3Q8R1N4 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nudcd3Q8R1N4 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nudcd3Q8R1N4 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Nudcd3Q8R1N4 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nudcd3Q8R1N4 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nudcd3Q8R1N4 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nudcd3Q8R1N4 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nudcd3Q8R1N4 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nudcd3Q8R1N4 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nudcd3Q8R1N4 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Nudcd3Q8R1N4 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nudcd3Q8R1N4 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.5■□□□□ 0.07
Nudcd3Q8R1N4 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.5■□□□□ 0.07
Nudcd3Q8R1N4 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nudcd3Q8R1N4 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nudcd3Q8R1N4 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Nudcd3Q8R1N4 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.49■□□□□ 0.07
Nudcd3Q8R1N4 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nudcd3Q8R1N4 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
Nudcd3Q8R1N4 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nudcd3Q8R1N4 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nudcd3Q8R1N4 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nudcd3Q8R1N4 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nudcd3Q8R1N4 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nudcd3Q8R1N4 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.49■□□□□ 0.07
Nudcd3Q8R1N4 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nudcd3Q8R1N4 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Nudcd3Q8R1N4 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Nudcd3Q8R1N4 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Nudcd3Q8R1N4 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.49■□□□□ 0.07
Nudcd3Q8R1N4 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nudcd3Q8R1N4 Gm27011-201ENSMUST00000182352 972 ntBASIC15.49■□□□□ 0.07
Nudcd3Q8R1N4 Gm27389-201ENSMUST00000183622 195 ntBASIC15.49■□□□□ 0.07
Nudcd3Q8R1N4 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.49■□□□□ 0.07
Nudcd3Q8R1N4 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nudcd3Q8R1N4 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Nudcd3Q8R1N4 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.49■□□□□ 0.07
Nudcd3Q8R1N4 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nudcd3Q8R1N4 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nudcd3Q8R1N4 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nudcd3Q8R1N4 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nudcd3Q8R1N4 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nudcd3Q8R1N4 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.49■□□□□ 0.07
Nudcd3Q8R1N4 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nudcd3Q8R1N4 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Nudcd3Q8R1N4 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nudcd3Q8R1N4 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nudcd3Q8R1N4 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nudcd3Q8R1N4 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nudcd3Q8R1N4 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nudcd3Q8R1N4 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.48■□□□□ 0.07
Nudcd3Q8R1N4 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nudcd3Q8R1N4 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nudcd3Q8R1N4 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Nudcd3Q8R1N4 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC15.48■□□□□ 0.07
Nudcd3Q8R1N4 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nudcd3Q8R1N4 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Nudcd3Q8R1N4 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.48■□□□□ 0.07
Nudcd3Q8R1N4 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nudcd3Q8R1N4 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Nudcd3Q8R1N4 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Nudcd3Q8R1N4 Gm37055-201ENSMUST00000191866 133 ntBASIC15.48■□□□□ 0.07
Nudcd3Q8R1N4 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.48■□□□□ 0.07
Nudcd3Q8R1N4 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.48■□□□□ 0.07
Nudcd3Q8R1N4 Gm45058-201ENSMUST00000205810 766 ntBASIC15.48■□□□□ 0.07
Nudcd3Q8R1N4 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC15.48■□□□□ 0.07
Nudcd3Q8R1N4 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nudcd3Q8R1N4 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nudcd3Q8R1N4 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nudcd3Q8R1N4 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nudcd3Q8R1N4 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.48■□□□□ 0.07
Nudcd3Q8R1N4 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms