Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Clrn1Q8K445 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Clrn1Q8K445 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Clrn1Q8K445 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Clrn1Q8K445 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Clrn1Q8K445 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Clrn1Q8K445 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.63□□□□□ -0.07
Clrn1Q8K445 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.63□□□□□ -0.07
Clrn1Q8K445 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Clrn1Q8K445 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Clrn1Q8K445 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Clrn1Q8K445 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Clrn1Q8K445 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Clrn1Q8K445 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Clrn1Q8K445 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Clrn1Q8K445 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Clrn1Q8K445 Gm8344-201ENSMUST00000119813 856 ntBASIC14.63□□□□□ -0.07
Clrn1Q8K445 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.63□□□□□ -0.07
Clrn1Q8K445 Gm19164-201ENSMUST00000210667 640 ntBASIC14.63□□□□□ -0.07
Clrn1Q8K445 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Clrn1Q8K445 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Clrn1Q8K445 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Clrn1Q8K445 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Clrn1Q8K445 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Clrn1Q8K445 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Clrn1Q8K445 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Clrn1Q8K445 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Clrn1Q8K445 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Clrn1Q8K445 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Clrn1Q8K445 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Clrn1Q8K445 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Clrn1Q8K445 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Clrn1Q8K445 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Clrn1Q8K445 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Clrn1Q8K445 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Clrn1Q8K445 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Clrn1Q8K445 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Clrn1Q8K445 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Clrn1Q8K445 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Clrn1Q8K445 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Clrn1Q8K445 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Clrn1Q8K445 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Clrn1Q8K445 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.62□□□□□ -0.07
Clrn1Q8K445 Gm7153-201ENSMUST00000117092 455 ntBASIC14.62□□□□□ -0.07
Clrn1Q8K445 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.62□□□□□ -0.07
Clrn1Q8K445 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Clrn1Q8K445 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Clrn1Q8K445 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.62□□□□□ -0.07
Clrn1Q8K445 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.62□□□□□ -0.07
Clrn1Q8K445 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Clrn1Q8K445 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Clrn1Q8K445 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Clrn1Q8K445 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Clrn1Q8K445 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Clrn1Q8K445 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Clrn1Q8K445 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Clrn1Q8K445 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Clrn1Q8K445 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Clrn1Q8K445 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.61□□□□□ -0.07
Clrn1Q8K445 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Clrn1Q8K445 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Clrn1Q8K445 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Clrn1Q8K445 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.61□□□□□ -0.07
Clrn1Q8K445 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Clrn1Q8K445 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.61□□□□□ -0.07
Clrn1Q8K445 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Clrn1Q8K445 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.61□□□□□ -0.07
Clrn1Q8K445 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Clrn1Q8K445 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.61□□□□□ -0.07
Clrn1Q8K445 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Clrn1Q8K445 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Clrn1Q8K445 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Clrn1Q8K445 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Clrn1Q8K445 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Clrn1Q8K445 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Clrn1Q8K445 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Clrn1Q8K445 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Clrn1Q8K445 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.6□□□□□ -0.07
Clrn1Q8K445 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clrn1Q8K445 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clrn1Q8K445 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clrn1Q8K445 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Clrn1Q8K445 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clrn1Q8K445 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clrn1Q8K445 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clrn1Q8K445 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clrn1Q8K445 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clrn1Q8K445 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clrn1Q8K445 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.6□□□□□ -0.07
Clrn1Q8K445 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clrn1Q8K445 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clrn1Q8K445 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clrn1Q8K445 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clrn1Q8K445 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.6□□□□□ -0.07
Clrn1Q8K445 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clrn1Q8K445 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clrn1Q8K445 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Clrn1Q8K445 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.6□□□□□ -0.07
Clrn1Q8K445 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.6□□□□□ -0.07
Clrn1Q8K445 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms