Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfwd3Q8CIK8 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfwd3Q8CIK8 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfwd3Q8CIK8 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rfwd3Q8CIK8 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rfwd3Q8CIK8 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rfwd3Q8CIK8 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
Rfwd3Q8CIK8 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rfwd3Q8CIK8 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfwd3Q8CIK8 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfwd3Q8CIK8 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.58□□□□□ -0.08
Rfwd3Q8CIK8 Gm8097-201ENSMUST00000117903 829 ntBASIC14.58□□□□□ -0.08
Rfwd3Q8CIK8 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfwd3Q8CIK8 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.58□□□□□ -0.08
Rfwd3Q8CIK8 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.58□□□□□ -0.08
Rfwd3Q8CIK8 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.58□□□□□ -0.08
Rfwd3Q8CIK8 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rfwd3Q8CIK8 Gm44357-201ENSMUST00000195897 142 ntBASIC14.58□□□□□ -0.08
Rfwd3Q8CIK8 Gm19658-201ENSMUST00000196231 138 ntBASIC14.58□□□□□ -0.08
Rfwd3Q8CIK8 Gm44367-201ENSMUST00000196836 138 ntBASIC14.58□□□□□ -0.08
Rfwd3Q8CIK8 Gm44350-201ENSMUST00000197197 138 ntBASIC14.58□□□□□ -0.08
Rfwd3Q8CIK8 Gm44390-201ENSMUST00000197533 144 ntBASIC14.58□□□□□ -0.08
Rfwd3Q8CIK8 Gm44313-201ENSMUST00000198018 138 ntBASIC14.58□□□□□ -0.08
Rfwd3Q8CIK8 Gm44486-201ENSMUST00000198508 138 ntBASIC14.58□□□□□ -0.08
Rfwd3Q8CIK8 Gm44314-201ENSMUST00000199263 138 ntBASIC14.58□□□□□ -0.08
Rfwd3Q8CIK8 Gm44394-201ENSMUST00000199558 138 ntBASIC14.58□□□□□ -0.08
Rfwd3Q8CIK8 Gm44484-201ENSMUST00000199873 138 ntBASIC14.58□□□□□ -0.08
Rfwd3Q8CIK8 Gm44466-201ENSMUST00000200264 138 ntBASIC14.58□□□□□ -0.08
Rfwd3Q8CIK8 Gm44359-201ENSMUST00000200671 138 ntBASIC14.58□□□□□ -0.08
Rfwd3Q8CIK8 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfwd3Q8CIK8 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.58□□□□□ -0.08
Rfwd3Q8CIK8 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.58□□□□□ -0.08
Rfwd3Q8CIK8 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfwd3Q8CIK8 Gm18622-201ENSMUST00000219361 595 ntBASIC14.58□□□□□ -0.08
Rfwd3Q8CIK8 Rps4l-201ENSMUST00000071745 943 ntBASIC14.58□□□□□ -0.08
Rfwd3Q8CIK8 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfwd3Q8CIK8 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.58□□□□□ -0.08
Rfwd3Q8CIK8 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rfwd3Q8CIK8 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfwd3Q8CIK8 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.58□□□□□ -0.08
Rfwd3Q8CIK8 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfwd3Q8CIK8 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfwd3Q8CIK8 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfwd3Q8CIK8 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfwd3Q8CIK8 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfwd3Q8CIK8 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfwd3Q8CIK8 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfwd3Q8CIK8 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rfwd3Q8CIK8 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfwd3Q8CIK8 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.57□□□□□ -0.08
Rfwd3Q8CIK8 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.57□□□□□ -0.08
Rfwd3Q8CIK8 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfwd3Q8CIK8 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.57□□□□□ -0.08
Rfwd3Q8CIK8 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Rfwd3Q8CIK8 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.57□□□□□ -0.08
Rfwd3Q8CIK8 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.57□□□□□ -0.08
Rfwd3Q8CIK8 Gm6296-201ENSMUST00000222599 943 ntBASIC14.57□□□□□ -0.08
Rfwd3Q8CIK8 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfwd3Q8CIK8 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rfwd3Q8CIK8 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfwd3Q8CIK8 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfwd3Q8CIK8 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rfwd3Q8CIK8 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfwd3Q8CIK8 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfwd3Q8CIK8 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfwd3Q8CIK8 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfwd3Q8CIK8 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfwd3Q8CIK8 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Rfwd3Q8CIK8 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rfwd3Q8CIK8 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Rfwd3Q8CIK8 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rfwd3Q8CIK8 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Rfwd3Q8CIK8 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfwd3Q8CIK8 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Rfwd3Q8CIK8 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfwd3Q8CIK8 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfwd3Q8CIK8 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Rfwd3Q8CIK8 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rfwd3Q8CIK8 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.56□□□□□ -0.08
Rfwd3Q8CIK8 Gm4535-201ENSMUST00000182274 558 ntBASIC14.56□□□□□ -0.08
Rfwd3Q8CIK8 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.56□□□□□ -0.08
Rfwd3Q8CIK8 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.56□□□□□ -0.08
Rfwd3Q8CIK8 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfwd3Q8CIK8 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfwd3Q8CIK8 Gm10355-201ENSMUST00000097146 517 ntBASIC14.56□□□□□ -0.08
Rfwd3Q8CIK8 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rfwd3Q8CIK8 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Rfwd3Q8CIK8 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfwd3Q8CIK8 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfwd3Q8CIK8 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfwd3Q8CIK8 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Rfwd3Q8CIK8 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.56□□□□□ -0.08
Rfwd3Q8CIK8 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfwd3Q8CIK8 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfwd3Q8CIK8 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfwd3Q8CIK8 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfwd3Q8CIK8 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Rfwd3Q8CIK8 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfwd3Q8CIK8 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Rfwd3Q8CIK8 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms