Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim5Q8CI51 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim5Q8CI51 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim5Q8CI51 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim5Q8CI51 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim5Q8CI51 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim5Q8CI51 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim5Q8CI51 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Pdlim5Q8CI51 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Pdlim5Q8CI51 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Pdlim5Q8CI51 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pdlim5Q8CI51 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pdlim5Q8CI51 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pdlim5Q8CI51 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pdlim5Q8CI51 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pdlim5Q8CI51 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.27□□□□□ -0.12
Pdlim5Q8CI51 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Pdlim5Q8CI51 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pdlim5Q8CI51 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pdlim5Q8CI51 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Pdlim5Q8CI51 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pdlim5Q8CI51 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pdlim5Q8CI51 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdlim5Q8CI51 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Pdlim5Q8CI51 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Pdlim5Q8CI51 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Pdlim5Q8CI51 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Pdlim5Q8CI51 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.27□□□□□ -0.13
Pdlim5Q8CI51 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.27□□□□□ -0.13
Pdlim5Q8CI51 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdlim5Q8CI51 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdlim5Q8CI51 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdlim5Q8CI51 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdlim5Q8CI51 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdlim5Q8CI51 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdlim5Q8CI51 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pdlim5Q8CI51 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pdlim5Q8CI51 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdlim5Q8CI51 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdlim5Q8CI51 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pdlim5Q8CI51 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdlim5Q8CI51 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdlim5Q8CI51 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim5Q8CI51 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim5Q8CI51 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim5Q8CI51 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim5Q8CI51 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim5Q8CI51 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim5Q8CI51 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim5Q8CI51 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim5Q8CI51 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim5Q8CI51 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim5Q8CI51 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim5Q8CI51 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.26□□□□□ -0.13
Pdlim5Q8CI51 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Pdlim5Q8CI51 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.26□□□□□ -0.13
Pdlim5Q8CI51 Gm7367-201ENSMUST00000057611 492 ntBASIC14.26□□□□□ -0.13
Pdlim5Q8CI51 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim5Q8CI51 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim5Q8CI51 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim5Q8CI51 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.26□□□□□ -0.13
Pdlim5Q8CI51 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim5Q8CI51 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim5Q8CI51 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim5Q8CI51 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim5Q8CI51 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim5Q8CI51 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pdlim5Q8CI51 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Pdlim5Q8CI51 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim5Q8CI51 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim5Q8CI51 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim5Q8CI51 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim5Q8CI51 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim5Q8CI51 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim5Q8CI51 Gm15372-201ENSMUST00000120729 834 ntBASIC14.25□□□□□ -0.13
Pdlim5Q8CI51 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.25□□□□□ -0.13
Pdlim5Q8CI51 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.25□□□□□ -0.13
Pdlim5Q8CI51 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim5Q8CI51 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim5Q8CI51 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim5Q8CI51 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Pdlim5Q8CI51 Gm33142-201ENSMUST00000193913 867 ntBASIC14.25□□□□□ -0.13
Pdlim5Q8CI51 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.25□□□□□ -0.13
Pdlim5Q8CI51 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim5Q8CI51 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim5Q8CI51 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim5Q8CI51 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim5Q8CI51 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim5Q8CI51 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim5Q8CI51 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim5Q8CI51 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim5Q8CI51 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pdlim5Q8CI51 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pdlim5Q8CI51 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim5Q8CI51 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim5Q8CI51 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim5Q8CI51 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim5Q8CI51 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim5Q8CI51 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim5Q8CI51 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms