Protein–RNA interactions for Protein: Q8CFI2

Cdc34, Ubiquitin-conjugating enzyme E2 R1, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc34Q8CFI2 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdc34Q8CFI2 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdc34Q8CFI2 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Cdc34Q8CFI2 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdc34Q8CFI2 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdc34Q8CFI2 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdc34Q8CFI2 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdc34Q8CFI2 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC12.45□□□□□ -0.42
Cdc34Q8CFI2 Gm37179-201ENSMUST00000194862 823 ntBASIC12.45□□□□□ -0.42
Cdc34Q8CFI2 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdc34Q8CFI2 Gm20049-201ENSMUST00000219950 730 ntBASIC12.45□□□□□ -0.42
Cdc34Q8CFI2 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC12.45□□□□□ -0.42
Cdc34Q8CFI2 Gm10602-201ENSMUST00000098239 609 ntBASIC12.45□□□□□ -0.42
Cdc34Q8CFI2 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdc34Q8CFI2 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdc34Q8CFI2 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdc34Q8CFI2 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdc34Q8CFI2 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdc34Q8CFI2 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdc34Q8CFI2 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdc34Q8CFI2 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdc34Q8CFI2 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Cdc34Q8CFI2 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdc34Q8CFI2 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Cdc34Q8CFI2 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.45□□□□□ -0.42
Cdc34Q8CFI2 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Cdc34Q8CFI2 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdc34Q8CFI2 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdc34Q8CFI2 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdc34Q8CFI2 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Cdc34Q8CFI2 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdc34Q8CFI2 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Cdc34Q8CFI2 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Cdc34Q8CFI2 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Cdc34Q8CFI2 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Cdc34Q8CFI2 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdc34Q8CFI2 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdc34Q8CFI2 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdc34Q8CFI2 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdc34Q8CFI2 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdc34Q8CFI2 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdc34Q8CFI2 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdc34Q8CFI2 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdc34Q8CFI2 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdc34Q8CFI2 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdc34Q8CFI2 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdc34Q8CFI2 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.44□□□□□ -0.42
Cdc34Q8CFI2 Gm15442-201ENSMUST00000117905 1527 ntBASIC12.44□□□□□ -0.42
Cdc34Q8CFI2 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdc34Q8CFI2 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.44□□□□□ -0.42
Cdc34Q8CFI2 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdc34Q8CFI2 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdc34Q8CFI2 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Cdc34Q8CFI2 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdc34Q8CFI2 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Cdc34Q8CFI2 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC12.44□□□□□ -0.42
Cdc34Q8CFI2 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Cdc34Q8CFI2 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.44□□□□□ -0.42
Cdc34Q8CFI2 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdc34Q8CFI2 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdc34Q8CFI2 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Cdc34Q8CFI2 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdc34Q8CFI2 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdc34Q8CFI2 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdc34Q8CFI2 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Cdc34Q8CFI2 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdc34Q8CFI2 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Cdc34Q8CFI2 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdc34Q8CFI2 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdc34Q8CFI2 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdc34Q8CFI2 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdc34Q8CFI2 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdc34Q8CFI2 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdc34Q8CFI2 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdc34Q8CFI2 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdc34Q8CFI2 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdc34Q8CFI2 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdc34Q8CFI2 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdc34Q8CFI2 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdc34Q8CFI2 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdc34Q8CFI2 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdc34Q8CFI2 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.43□□□□□ -0.42
Cdc34Q8CFI2 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdc34Q8CFI2 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdc34Q8CFI2 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdc34Q8CFI2 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdc34Q8CFI2 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdc34Q8CFI2 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC12.43□□□□□ -0.42
Cdc34Q8CFI2 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdc34Q8CFI2 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Cdc34Q8CFI2 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdc34Q8CFI2 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdc34Q8CFI2 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdc34Q8CFI2 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdc34Q8CFI2 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdc34Q8CFI2 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdc34Q8CFI2 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.43□□□□□ -0.42
Cdc34Q8CFI2 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdc34Q8CFI2 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdc34Q8CFI2 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms