Protein–RNA interactions for Protein: Q8C393

Zim1, Zinc finger, imprinted 1, mousemouse

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zim1Q8C393 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Zim1Q8C393 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Zim1Q8C393 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Zim1Q8C393 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Zim1Q8C393 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Zim1Q8C393 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Zim1Q8C393 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Zim1Q8C393 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Zim1Q8C393 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Zim1Q8C393 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Zim1Q8C393 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Zim1Q8C393 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Zim1Q8C393 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Zim1Q8C393 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.16□□□□□ -0.3
Zim1Q8C393 Gm21362-201ENSMUST00000194272 928 ntBASIC13.16□□□□□ -0.3
Zim1Q8C393 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC13.16□□□□□ -0.3
Zim1Q8C393 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Zim1Q8C393 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Zim1Q8C393 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Zim1Q8C393 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Zim1Q8C393 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Zim1Q8C393 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Zim1Q8C393 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Zim1Q8C393 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Zim1Q8C393 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC13.16□□□□□ -0.3
Zim1Q8C393 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Zim1Q8C393 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC13.16□□□□□ -0.3
Zim1Q8C393 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Zim1Q8C393 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Zim1Q8C393 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Zim1Q8C393 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Zim1Q8C393 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Zim1Q8C393 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.16□□□□□ -0.3
Zim1Q8C393 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Zim1Q8C393 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Zim1Q8C393 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.15□□□□□ -0.3
Zim1Q8C393 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Zim1Q8C393 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Zim1Q8C393 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Zim1Q8C393 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Zim1Q8C393 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Zim1Q8C393 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Zim1Q8C393 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Zim1Q8C393 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC13.15□□□□□ -0.3
Zim1Q8C393 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Zim1Q8C393 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Zim1Q8C393 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Zim1Q8C393 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Zim1Q8C393 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Zim1Q8C393 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Zim1Q8C393 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Zim1Q8C393 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Zim1Q8C393 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Zim1Q8C393 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Zim1Q8C393 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Zim1Q8C393 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
Zim1Q8C393 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.31
Zim1Q8C393 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Zim1Q8C393 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Zim1Q8C393 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Zim1Q8C393 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Zim1Q8C393 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Zim1Q8C393 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Zim1Q8C393 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Zim1Q8C393 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Zim1Q8C393 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Zim1Q8C393 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Zim1Q8C393 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Zim1Q8C393 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Zim1Q8C393 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Zim1Q8C393 Gm7284-201ENSMUST00000131667 944 ntBASIC13.14□□□□□ -0.31
Zim1Q8C393 Gm18421-201ENSMUST00000204122 625 ntBASIC13.14□□□□□ -0.31
Zim1Q8C393 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Zim1Q8C393 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Zim1Q8C393 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Zim1Q8C393 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Zim1Q8C393 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Zim1Q8C393 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Zim1Q8C393 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Zim1Q8C393 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Zim1Q8C393 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Zim1Q8C393 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Zim1Q8C393 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Zim1Q8C393 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Zim1Q8C393 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Zim1Q8C393 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Zim1Q8C393 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Zim1Q8C393 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.13□□□□□ -0.31
Zim1Q8C393 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zim1Q8C393 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zim1Q8C393 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Zim1Q8C393 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Zim1Q8C393 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zim1Q8C393 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.13□□□□□ -0.31
Zim1Q8C393 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Zim1Q8C393 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.13□□□□□ -0.31
Zim1Q8C393 Gm29707-201ENSMUST00000196325 491 ntBASIC13.13□□□□□ -0.31
Zim1Q8C393 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zim1Q8C393 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zim1Q8C393 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms