Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp44Q8C2S0 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp44Q8C2S0 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp44Q8C2S0 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Usp44Q8C2S0 Gm38318-201ENSMUST00000195769 1706 ntBASIC18.09■□□□□ 0.49
Usp44Q8C2S0 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp44Q8C2S0 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp44Q8C2S0 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Usp44Q8C2S0 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
Usp44Q8C2S0 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Usp44Q8C2S0 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Usp44Q8C2S0 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp44Q8C2S0 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp44Q8C2S0 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Usp44Q8C2S0 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC18.09■□□□□ 0.49
Usp44Q8C2S0 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Usp44Q8C2S0 Mir5126-201ENSMUST00000175513 77 ntBASIC18.09■□□□□ 0.49
Usp44Q8C2S0 Gm4899-201ENSMUST00000178708 719 ntBASIC18.09■□□□□ 0.49
Usp44Q8C2S0 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Usp44Q8C2S0 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp44Q8C2S0 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp44Q8C2S0 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC18.09■□□□□ 0.49
Usp44Q8C2S0 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp44Q8C2S0 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Usp44Q8C2S0 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Usp44Q8C2S0 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Usp44Q8C2S0 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC18.09■□□□□ 0.49
Usp44Q8C2S0 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Usp44Q8C2S0 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Usp44Q8C2S0 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Usp44Q8C2S0 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Usp44Q8C2S0 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Usp44Q8C2S0 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp44Q8C2S0 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Usp44Q8C2S0 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp44Q8C2S0 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp44Q8C2S0 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp44Q8C2S0 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Usp44Q8C2S0 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.08■□□□□ 0.48
Usp44Q8C2S0 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Usp44Q8C2S0 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp44Q8C2S0 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC18.08■□□□□ 0.48
Usp44Q8C2S0 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.08■□□□□ 0.48
Usp44Q8C2S0 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Usp44Q8C2S0 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp44Q8C2S0 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Usp44Q8C2S0 AC151836.1-202ENSMUST00000226259 753 ntBASIC18.08■□□□□ 0.48
Usp44Q8C2S0 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Usp44Q8C2S0 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp44Q8C2S0 Gm7461-201ENSMUST00000058918 827 ntBASIC18.08■□□□□ 0.48
Usp44Q8C2S0 Gm15590-201ENSMUST00000078419 552 ntBASIC18.08■□□□□ 0.48
Usp44Q8C2S0 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp44Q8C2S0 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Usp44Q8C2S0 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.08■□□□□ 0.48
Usp44Q8C2S0 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp44Q8C2S0 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Usp44Q8C2S0 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp44Q8C2S0 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Usp44Q8C2S0 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp44Q8C2S0 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC18.08■□□□□ 0.48
Usp44Q8C2S0 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Usp44Q8C2S0 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp44Q8C2S0 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp44Q8C2S0 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp44Q8C2S0 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Usp44Q8C2S0 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Usp44Q8C2S0 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp44Q8C2S0 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Usp44Q8C2S0 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
Usp44Q8C2S0 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC18.07■□□□□ 0.48
Usp44Q8C2S0 Gm11453-201ENSMUST00000117318 1007 ntBASIC18.07■□□□□ 0.48
Usp44Q8C2S0 Gm10499-201ENSMUST00000174094 934 ntBASIC18.07■□□□□ 0.48
Usp44Q8C2S0 Gm27628-201ENSMUST00000184911 107 ntBASIC18.07■□□□□ 0.48
Usp44Q8C2S0 Mzt1-203ENSMUST00000227948 952 ntBASIC18.07■□□□□ 0.48
Usp44Q8C2S0 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Usp44Q8C2S0 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp44Q8C2S0 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Usp44Q8C2S0 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp44Q8C2S0 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC18.07■□□□□ 0.48
Usp44Q8C2S0 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Usp44Q8C2S0 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Usp44Q8C2S0 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp44Q8C2S0 Best4-ps-201ENSMUST00000129783 1380 ntBASIC18.06■□□□□ 0.48
Usp44Q8C2S0 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp44Q8C2S0 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp44Q8C2S0 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp44Q8C2S0 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp44Q8C2S0 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp44Q8C2S0 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp44Q8C2S0 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Usp44Q8C2S0 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC18.06■□□□□ 0.48
Usp44Q8C2S0 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Usp44Q8C2S0 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Usp44Q8C2S0 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp44Q8C2S0 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp44Q8C2S0 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.06■□□□□ 0.48
Usp44Q8C2S0 CT009510.1-201ENSMUST00000227972 270 ntBASIC18.06■□□□□ 0.48
Usp44Q8C2S0 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp44Q8C2S0 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp44Q8C2S0 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms