Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.68■□□□□ 0.1
Sh3rf2Q8BZT2 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.68■□□□□ 0.1
Sh3rf2Q8BZT2 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3rf2Q8BZT2 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3rf2Q8BZT2 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Sh3rf2Q8BZT2 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3rf2Q8BZT2 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Sh3rf2Q8BZT2 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3rf2Q8BZT2 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.68■□□□□ 0.1
Sh3rf2Q8BZT2 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3rf2Q8BZT2 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3rf2Q8BZT2 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3rf2Q8BZT2 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3rf2Q8BZT2 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Sh3rf2Q8BZT2 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.68■□□□□ 0.1
Sh3rf2Q8BZT2 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3rf2Q8BZT2 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3rf2Q8BZT2 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3rf2Q8BZT2 Dancr-204ENSMUST00000132389 2347 ntBASIC15.67■□□□□ 0.1
Sh3rf2Q8BZT2 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.67■□□□□ 0.1
Sh3rf2Q8BZT2 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3rf2Q8BZT2 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3rf2Q8BZT2 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Sh3rf2Q8BZT2 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3rf2Q8BZT2 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3rf2Q8BZT2 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.67■□□□□ 0.1
Sh3rf2Q8BZT2 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3rf2Q8BZT2 Gm14722-201ENSMUST00000118943 689 ntBASIC15.67■□□□□ 0.1
Sh3rf2Q8BZT2 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC15.67■□□□□ 0.1
Sh3rf2Q8BZT2 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3rf2Q8BZT2 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3rf2Q8BZT2 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3rf2Q8BZT2 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3rf2Q8BZT2 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.67■□□□□ 0.1
Sh3rf2Q8BZT2 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3rf2Q8BZT2 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3rf2Q8BZT2 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3rf2Q8BZT2 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3rf2Q8BZT2 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3rf2Q8BZT2 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3rf2Q8BZT2 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3rf2Q8BZT2 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3rf2Q8BZT2 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3rf2Q8BZT2 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sh3rf2Q8BZT2 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3rf2Q8BZT2 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Sh3rf2Q8BZT2 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3rf2Q8BZT2 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3rf2Q8BZT2 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3rf2Q8BZT2 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3rf2Q8BZT2 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3rf2Q8BZT2 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3rf2Q8BZT2 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3rf2Q8BZT2 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Sh3rf2Q8BZT2 Gm5177-201ENSMUST00000183092 997 ntBASIC15.66■□□□□ 0.1
Sh3rf2Q8BZT2 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3rf2Q8BZT2 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.66■□□□□ 0.1
Sh3rf2Q8BZT2 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3rf2Q8BZT2 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3rf2Q8BZT2 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3rf2Q8BZT2 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Sh3rf2Q8BZT2 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3rf2Q8BZT2 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3rf2Q8BZT2 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3rf2Q8BZT2 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Sh3rf2Q8BZT2 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh3rf2Q8BZT2 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh3rf2Q8BZT2 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh3rf2Q8BZT2 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.65■□□□□ 0.1
Sh3rf2Q8BZT2 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh3rf2Q8BZT2 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.65■□□□□ 0.1
Sh3rf2Q8BZT2 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh3rf2Q8BZT2 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh3rf2Q8BZT2 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh3rf2Q8BZT2 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Sh3rf2Q8BZT2 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh3rf2Q8BZT2 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sh3rf2Q8BZT2 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh3rf2Q8BZT2 Gm45747-201ENSMUST00000212203 999 ntBASIC15.65■□□□□ 0.1
Sh3rf2Q8BZT2 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.65■□□□□ 0.1
Sh3rf2Q8BZT2 Chchd1-203ENSMUST00000224633 557 ntBASIC15.65■□□□□ 0.1
Sh3rf2Q8BZT2 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh3rf2Q8BZT2 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh3rf2Q8BZT2 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh3rf2Q8BZT2 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh3rf2Q8BZT2 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh3rf2Q8BZT2 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Sh3rf2Q8BZT2 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh3rf2Q8BZT2 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh3rf2Q8BZT2 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh3rf2Q8BZT2 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh3rf2Q8BZT2 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh3rf2Q8BZT2 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.65■□□□□ 0.1
Sh3rf2Q8BZT2 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.65■□□□□ 0.1
Sh3rf2Q8BZT2 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Sh3rf2Q8BZT2 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh3rf2Q8BZT2 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.64■□□□□ 0.09
Sh3rf2Q8BZT2 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh3rf2Q8BZT2 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sh3rf2Q8BZT2 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms