Protein–RNA interactions for Protein: Q8BW72

Kdm4a, Lysine-specific demethylase 4A, mousemouse

Predictions only

Length 1,064 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm4aQ8BW72 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Kdm4aQ8BW72 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Kdm4aQ8BW72 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC18.24■□□□□ 0.51
Kdm4aQ8BW72 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC18.24■□□□□ 0.51
Kdm4aQ8BW72 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Kdm4aQ8BW72 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC18.24■□□□□ 0.51
Kdm4aQ8BW72 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC18.24■□□□□ 0.51
Kdm4aQ8BW72 Gm18669-201ENSMUST00000216049 778 ntBASIC18.24■□□□□ 0.51
Kdm4aQ8BW72 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.24■□□□□ 0.51
Kdm4aQ8BW72 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.24■□□□□ 0.51
Kdm4aQ8BW72 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Kdm4aQ8BW72 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Kdm4aQ8BW72 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Kdm4aQ8BW72 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Kdm4aQ8BW72 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.24■□□□□ 0.51
Kdm4aQ8BW72 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Kdm4aQ8BW72 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Kdm4aQ8BW72 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Kdm4aQ8BW72 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Kdm4aQ8BW72 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Kdm4aQ8BW72 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Kdm4aQ8BW72 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Kdm4aQ8BW72 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Kdm4aQ8BW72 Gm11960-202ENSMUST00000181063 2858 ntBASIC18.24■□□□□ 0.51
Kdm4aQ8BW72 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Kdm4aQ8BW72 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Kdm4aQ8BW72 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC18.23■□□□□ 0.51
Kdm4aQ8BW72 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Kdm4aQ8BW72 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Kdm4aQ8BW72 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Kdm4aQ8BW72 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Kdm4aQ8BW72 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Kdm4aQ8BW72 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
Kdm4aQ8BW72 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Kdm4aQ8BW72 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Kdm4aQ8BW72 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.23■□□□□ 0.51
Kdm4aQ8BW72 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Kdm4aQ8BW72 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Kdm4aQ8BW72 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Kdm4aQ8BW72 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Kdm4aQ8BW72 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Kdm4aQ8BW72 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Kdm4aQ8BW72 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.23■□□□□ 0.51
Kdm4aQ8BW72 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Kdm4aQ8BW72 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Kdm4aQ8BW72 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.23■□□□□ 0.51
Kdm4aQ8BW72 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Kdm4aQ8BW72 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Kdm4aQ8BW72 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Kdm4aQ8BW72 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Kdm4aQ8BW72 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Kdm4aQ8BW72 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Kdm4aQ8BW72 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Kdm4aQ8BW72 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Kdm4aQ8BW72 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Kdm4aQ8BW72 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Kdm4aQ8BW72 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Kdm4aQ8BW72 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Kdm4aQ8BW72 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Kdm4aQ8BW72 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Kdm4aQ8BW72 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC18.22■□□□□ 0.51
Kdm4aQ8BW72 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Kdm4aQ8BW72 Gm12895-201ENSMUST00000122214 226 ntBASIC18.22■□□□□ 0.51
Kdm4aQ8BW72 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.22■□□□□ 0.51
Kdm4aQ8BW72 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Kdm4aQ8BW72 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC18.22■□□□□ 0.51
Kdm4aQ8BW72 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.22■□□□□ 0.51
Kdm4aQ8BW72 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.22■□□□□ 0.51
Kdm4aQ8BW72 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Kdm4aQ8BW72 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC18.22■□□□□ 0.51
Kdm4aQ8BW72 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Kdm4aQ8BW72 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Kdm4aQ8BW72 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Kdm4aQ8BW72 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC18.22■□□□□ 0.51
Kdm4aQ8BW72 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Kdm4aQ8BW72 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Kdm4aQ8BW72 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Kdm4aQ8BW72 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Kdm4aQ8BW72 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Kdm4aQ8BW72 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Kdm4aQ8BW72 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Kdm4aQ8BW72 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Kdm4aQ8BW72 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Kdm4aQ8BW72 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Kdm4aQ8BW72 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Kdm4aQ8BW72 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Kdm4aQ8BW72 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Kdm4aQ8BW72 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Kdm4aQ8BW72 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Kdm4aQ8BW72 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Kdm4aQ8BW72 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Kdm4aQ8BW72 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Kdm4aQ8BW72 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Kdm4aQ8BW72 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Kdm4aQ8BW72 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Kdm4aQ8BW72 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Kdm4aQ8BW72 Gm15165-201ENSMUST00000118140 502 ntBASIC18.21■□□□□ 0.51
Kdm4aQ8BW72 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.21■□□□□ 0.51
Kdm4aQ8BW72 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.21■□□□□ 0.51
Kdm4aQ8BW72 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms