Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Ckap4Q8BMK4 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ckap4Q8BMK4 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ckap4Q8BMK4 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ckap4Q8BMK4 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ckap4Q8BMK4 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.71□□□□□ -0.05
Ckap4Q8BMK4 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ckap4Q8BMK4 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
Ckap4Q8BMK4 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ckap4Q8BMK4 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ckap4Q8BMK4 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ckap4Q8BMK4 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ckap4Q8BMK4 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Ckap4Q8BMK4 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ckap4Q8BMK4 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ckap4Q8BMK4 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ckap4Q8BMK4 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Ckap4Q8BMK4 Gm29518-201ENSMUST00000190858 372 ntBASIC14.71□□□□□ -0.05
Ckap4Q8BMK4 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.71□□□□□ -0.05
Ckap4Q8BMK4 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ckap4Q8BMK4 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ckap4Q8BMK4 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.71□□□□□ -0.05
Ckap4Q8BMK4 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ckap4Q8BMK4 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
Ckap4Q8BMK4 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ckap4Q8BMK4 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ckap4Q8BMK4 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.71□□□□□ -0.05
Ckap4Q8BMK4 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Ckap4Q8BMK4 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ckap4Q8BMK4 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ckap4Q8BMK4 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Ckap4Q8BMK4 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Ckap4Q8BMK4 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.71□□□□□ -0.06
Ckap4Q8BMK4 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Ckap4Q8BMK4 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ckap4Q8BMK4 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ckap4Q8BMK4 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.7□□□□□ -0.06
Ckap4Q8BMK4 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ckap4Q8BMK4 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ckap4Q8BMK4 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ckap4Q8BMK4 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Ckap4Q8BMK4 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ckap4Q8BMK4 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ckap4Q8BMK4 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.7□□□□□ -0.06
Ckap4Q8BMK4 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ckap4Q8BMK4 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ckap4Q8BMK4 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.7□□□□□ -0.06
Ckap4Q8BMK4 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ckap4Q8BMK4 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ckap4Q8BMK4 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Ckap4Q8BMK4 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ckap4Q8BMK4 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ckap4Q8BMK4 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ckap4Q8BMK4 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ckap4Q8BMK4 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ckap4Q8BMK4 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ckap4Q8BMK4 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ckap4Q8BMK4 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ckap4Q8BMK4 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ckap4Q8BMK4 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ckap4Q8BMK4 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ckap4Q8BMK4 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ckap4Q8BMK4 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ckap4Q8BMK4 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ckap4Q8BMK4 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ckap4Q8BMK4 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ckap4Q8BMK4 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ckap4Q8BMK4 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.69□□□□□ -0.06
Ckap4Q8BMK4 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ckap4Q8BMK4 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ckap4Q8BMK4 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ckap4Q8BMK4 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ckap4Q8BMK4 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ckap4Q8BMK4 Gm6345-202ENSMUST00000180900 204 ntBASIC14.69□□□□□ -0.06
Ckap4Q8BMK4 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ckap4Q8BMK4 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ckap4Q8BMK4 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ckap4Q8BMK4 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ckap4Q8BMK4 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ckap4Q8BMK4 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ckap4Q8BMK4 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ckap4Q8BMK4 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ckap4Q8BMK4 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ckap4Q8BMK4 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ckap4Q8BMK4 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ckap4Q8BMK4 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.69□□□□□ -0.06
Ckap4Q8BMK4 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ckap4Q8BMK4 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ckap4Q8BMK4 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ckap4Q8BMK4 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ckap4Q8BMK4 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Ckap4Q8BMK4 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ckap4Q8BMK4 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ckap4Q8BMK4 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ckap4Q8BMK4 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ckap4Q8BMK4 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ckap4Q8BMK4 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ckap4Q8BMK4 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ckap4Q8BMK4 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ckap4Q8BMK4 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms