Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Samm50Q8BGH2 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Samm50Q8BGH2 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Samm50Q8BGH2 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Samm50Q8BGH2 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Samm50Q8BGH2 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Samm50Q8BGH2 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Samm50Q8BGH2 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Samm50Q8BGH2 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Samm50Q8BGH2 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC18.18■□□□□ 0.5
Samm50Q8BGH2 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.18■□□□□ 0.5
Samm50Q8BGH2 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC18.18■□□□□ 0.5
Samm50Q8BGH2 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Samm50Q8BGH2 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.18■□□□□ 0.5
Samm50Q8BGH2 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Samm50Q8BGH2 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Samm50Q8BGH2 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Samm50Q8BGH2 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.18■□□□□ 0.5
Samm50Q8BGH2 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Samm50Q8BGH2 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Samm50Q8BGH2 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Samm50Q8BGH2 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Samm50Q8BGH2 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC18.17■□□□□ 0.5
Samm50Q8BGH2 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Samm50Q8BGH2 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Samm50Q8BGH2 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Samm50Q8BGH2 Tfap2a-203ENSMUST00000223869 2037 ntBASIC18.17■□□□□ 0.5
Samm50Q8BGH2 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Samm50Q8BGH2 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Samm50Q8BGH2 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.17■□□□□ 0.5
Samm50Q8BGH2 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.17■□□□□ 0.5
Samm50Q8BGH2 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Samm50Q8BGH2 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.17■□□□□ 0.5
Samm50Q8BGH2 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Samm50Q8BGH2 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Samm50Q8BGH2 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Samm50Q8BGH2 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Samm50Q8BGH2 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Samm50Q8BGH2 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Samm50Q8BGH2 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Samm50Q8BGH2 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Samm50Q8BGH2 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Samm50Q8BGH2 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Samm50Q8BGH2 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Samm50Q8BGH2 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Samm50Q8BGH2 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Samm50Q8BGH2 Gm6858-201ENSMUST00000208582 1468 ntBASIC18.16■□□□□ 0.5
Samm50Q8BGH2 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Samm50Q8BGH2 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Samm50Q8BGH2 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.16■□□□□ 0.5
Samm50Q8BGH2 Gm12644-201ENSMUST00000119935 606 ntBASIC18.16■□□□□ 0.5
Samm50Q8BGH2 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Samm50Q8BGH2 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.16■□□□□ 0.5
Samm50Q8BGH2 Gm43347-201ENSMUST00000200226 580 ntBASIC18.16■□□□□ 0.5
Samm50Q8BGH2 Gm34391-201ENSMUST00000203706 907 ntBASIC18.16■□□□□ 0.5
Samm50Q8BGH2 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.16■□□□□ 0.5
Samm50Q8BGH2 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.16■□□□□ 0.5
Samm50Q8BGH2 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Samm50Q8BGH2 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Samm50Q8BGH2 Birc2-201ENSMUST00000054878 378 ntBASIC18.16■□□□□ 0.5
Samm50Q8BGH2 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Samm50Q8BGH2 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Samm50Q8BGH2 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Samm50Q8BGH2 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Samm50Q8BGH2 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Samm50Q8BGH2 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Samm50Q8BGH2 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Samm50Q8BGH2 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC18.16■□□□□ 0.5
Samm50Q8BGH2 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Samm50Q8BGH2 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Samm50Q8BGH2 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Samm50Q8BGH2 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Samm50Q8BGH2 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18.15■□□□□ 0.5
Samm50Q8BGH2 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Samm50Q8BGH2 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Samm50Q8BGH2 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Samm50Q8BGH2 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Samm50Q8BGH2 Gm15165-201ENSMUST00000118140 502 ntBASIC18.15■□□□□ 0.5
Samm50Q8BGH2 Gm27867-201ENSMUST00000184778 125 ntBASIC18.15■□□□□ 0.5
Samm50Q8BGH2 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.15■□□□□ 0.5
Samm50Q8BGH2 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Samm50Q8BGH2 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Samm50Q8BGH2 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Samm50Q8BGH2 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Samm50Q8BGH2 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Samm50Q8BGH2 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Samm50Q8BGH2 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Samm50Q8BGH2 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Samm50Q8BGH2 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Samm50Q8BGH2 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Samm50Q8BGH2 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Samm50Q8BGH2 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Samm50Q8BGH2 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Samm50Q8BGH2 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Samm50Q8BGH2 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Samm50Q8BGH2 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.14■□□□□ 0.49
Samm50Q8BGH2 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Samm50Q8BGH2 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Samm50Q8BGH2 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC18.14■□□□□ 0.49
Samm50Q8BGH2 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms