Protein–RNA interactions for Protein: Q80ZI6

Lrsam1, E3 ubiquitin-protein ligase LRSAM1, mousemouse

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrsam1Q80ZI6 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lrsam1Q80ZI6 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lrsam1Q80ZI6 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.86■□□□□ 0.29
Lrsam1Q80ZI6 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lrsam1Q80ZI6 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lrsam1Q80ZI6 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.86■□□□□ 0.29
Lrsam1Q80ZI6 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lrsam1Q80ZI6 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.85■□□□□ 0.29
Lrsam1Q80ZI6 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lrsam1Q80ZI6 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lrsam1Q80ZI6 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lrsam1Q80ZI6 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.85■□□□□ 0.29
Lrsam1Q80ZI6 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lrsam1Q80ZI6 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lrsam1Q80ZI6 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lrsam1Q80ZI6 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lrsam1Q80ZI6 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lrsam1Q80ZI6 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Lrsam1Q80ZI6 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.85■□□□□ 0.29
Lrsam1Q80ZI6 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lrsam1Q80ZI6 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lrsam1Q80ZI6 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lrsam1Q80ZI6 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lrsam1Q80ZI6 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.85■□□□□ 0.29
Lrsam1Q80ZI6 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lrsam1Q80ZI6 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Lrsam1Q80ZI6 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lrsam1Q80ZI6 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lrsam1Q80ZI6 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lrsam1Q80ZI6 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lrsam1Q80ZI6 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lrsam1Q80ZI6 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lrsam1Q80ZI6 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lrsam1Q80ZI6 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lrsam1Q80ZI6 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.84■□□□□ 0.29
Lrsam1Q80ZI6 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lrsam1Q80ZI6 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lrsam1Q80ZI6 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.84■□□□□ 0.29
Lrsam1Q80ZI6 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lrsam1Q80ZI6 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lrsam1Q80ZI6 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lrsam1Q80ZI6 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lrsam1Q80ZI6 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
Lrsam1Q80ZI6 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lrsam1Q80ZI6 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lrsam1Q80ZI6 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.84■□□□□ 0.29
Lrsam1Q80ZI6 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lrsam1Q80ZI6 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Lrsam1Q80ZI6 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lrsam1Q80ZI6 Gm27459-201ENSMUST00000184860 107 ntBASIC16.84■□□□□ 0.29
Lrsam1Q80ZI6 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Lrsam1Q80ZI6 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lrsam1Q80ZI6 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lrsam1Q80ZI6 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.84■□□□□ 0.29
Lrsam1Q80ZI6 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Lrsam1Q80ZI6 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lrsam1Q80ZI6 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lrsam1Q80ZI6 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lrsam1Q80ZI6 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lrsam1Q80ZI6 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lrsam1Q80ZI6 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lrsam1Q80ZI6 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lrsam1Q80ZI6 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lrsam1Q80ZI6 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lrsam1Q80ZI6 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lrsam1Q80ZI6 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.84■□□□□ 0.29
Lrsam1Q80ZI6 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lrsam1Q80ZI6 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lrsam1Q80ZI6 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lrsam1Q80ZI6 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lrsam1Q80ZI6 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lrsam1Q80ZI6 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Lrsam1Q80ZI6 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Lrsam1Q80ZI6 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Lrsam1Q80ZI6 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.83■□□□□ 0.29
Lrsam1Q80ZI6 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Lrsam1Q80ZI6 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.83■□□□□ 0.28
Lrsam1Q80ZI6 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Lrsam1Q80ZI6 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.83■□□□□ 0.28
Lrsam1Q80ZI6 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lrsam1Q80ZI6 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.83■□□□□ 0.28
Lrsam1Q80ZI6 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Lrsam1Q80ZI6 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.83■□□□□ 0.28
Lrsam1Q80ZI6 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lrsam1Q80ZI6 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.83■□□□□ 0.28
Lrsam1Q80ZI6 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.83■□□□□ 0.28
Lrsam1Q80ZI6 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.83■□□□□ 0.28
Lrsam1Q80ZI6 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lrsam1Q80ZI6 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lrsam1Q80ZI6 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lrsam1Q80ZI6 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lrsam1Q80ZI6 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lrsam1Q80ZI6 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Lrsam1Q80ZI6 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lrsam1Q80ZI6 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lrsam1Q80ZI6 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lrsam1Q80ZI6 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.82■□□□□ 0.28
Lrsam1Q80ZI6 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lrsam1Q80ZI6 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lrsam1Q80ZI6 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms