Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim36Q80WG7 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
Trim36Q80WG7 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trim36Q80WG7 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim36Q80WG7 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
Trim36Q80WG7 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trim36Q80WG7 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim36Q80WG7 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim36Q80WG7 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim36Q80WG7 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim36Q80WG7 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim36Q80WG7 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.97□□□□□ -0.01
Trim36Q80WG7 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim36Q80WG7 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim36Q80WG7 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim36Q80WG7 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim36Q80WG7 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim36Q80WG7 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.97□□□□□ -0.01
Trim36Q80WG7 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim36Q80WG7 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim36Q80WG7 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim36Q80WG7 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim36Q80WG7 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim36Q80WG7 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim36Q80WG7 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim36Q80WG7 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.01
Trim36Q80WG7 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim36Q80WG7 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim36Q80WG7 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim36Q80WG7 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim36Q80WG7 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim36Q80WG7 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim36Q80WG7 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim36Q80WG7 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
Trim36Q80WG7 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim36Q80WG7 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim36Q80WG7 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
Trim36Q80WG7 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim36Q80WG7 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim36Q80WG7 Gm24589-201ENSMUST00000116692 94 ntBASIC14.96□□□□□ -0.01
Trim36Q80WG7 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim36Q80WG7 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.96□□□□□ -0.01
Trim36Q80WG7 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim36Q80WG7 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim36Q80WG7 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim36Q80WG7 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim36Q80WG7 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim36Q80WG7 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Trim36Q80WG7 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim36Q80WG7 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim36Q80WG7 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Trim36Q80WG7 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim36Q80WG7 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim36Q80WG7 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim36Q80WG7 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Trim36Q80WG7 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.95□□□□□ -0.02
Trim36Q80WG7 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Trim36Q80WG7 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.95□□□□□ -0.02
Trim36Q80WG7 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Trim36Q80WG7 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim36Q80WG7 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim36Q80WG7 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim36Q80WG7 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim36Q80WG7 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim36Q80WG7 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Trim36Q80WG7 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim36Q80WG7 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim36Q80WG7 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim36Q80WG7 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim36Q80WG7 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trim36Q80WG7 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim36Q80WG7 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trim36Q80WG7 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.95□□□□□ -0.02
Trim36Q80WG7 Gm34391-201ENSMUST00000203706 907 ntBASIC14.95□□□□□ -0.02
Trim36Q80WG7 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Trim36Q80WG7 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim36Q80WG7 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim36Q80WG7 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim36Q80WG7 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Trim36Q80WG7 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Trim36Q80WG7 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim36Q80WG7 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim36Q80WG7 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.95□□□□□ -0.02
Trim36Q80WG7 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim36Q80WG7 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim36Q80WG7 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim36Q80WG7 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim36Q80WG7 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trim36Q80WG7 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.94□□□□□ -0.02
Trim36Q80WG7 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.94□□□□□ -0.02
Trim36Q80WG7 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.94□□□□□ -0.02
Trim36Q80WG7 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim36Q80WG7 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim36Q80WG7 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim36Q80WG7 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim36Q80WG7 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim36Q80WG7 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim36Q80WG7 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.94□□□□□ -0.02
Trim36Q80WG7 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim36Q80WG7 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms