Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim62Q80V85 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim62Q80V85 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.02■□□□□ 0.16
Trim62Q80V85 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trim62Q80V85 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.02■□□□□ 0.16
Trim62Q80V85 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim62Q80V85 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.02■□□□□ 0.16
Trim62Q80V85 Gm8318-201ENSMUST00000182954 872 ntBASIC16.02■□□□□ 0.16
Trim62Q80V85 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trim62Q80V85 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim62Q80V85 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim62Q80V85 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Trim62Q80V85 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.02■□□□□ 0.16
Trim62Q80V85 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim62Q80V85 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim62Q80V85 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim62Q80V85 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
Trim62Q80V85 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim62Q80V85 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
Trim62Q80V85 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim62Q80V85 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.02■□□□□ 0.15
Trim62Q80V85 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim62Q80V85 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim62Q80V85 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim62Q80V85 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trim62Q80V85 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Trim62Q80V85 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.01■□□□□ 0.15
Trim62Q80V85 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim62Q80V85 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim62Q80V85 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim62Q80V85 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim62Q80V85 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim62Q80V85 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trim62Q80V85 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Trim62Q80V85 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim62Q80V85 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim62Q80V85 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trim62Q80V85 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim62Q80V85 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trim62Q80V85 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.01■□□□□ 0.15
Trim62Q80V85 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.01■□□□□ 0.15
Trim62Q80V85 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.01■□□□□ 0.15
Trim62Q80V85 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.01■□□□□ 0.15
Trim62Q80V85 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Trim62Q80V85 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.01■□□□□ 0.15
Trim62Q80V85 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.01■□□□□ 0.15
Trim62Q80V85 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim62Q80V85 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim62Q80V85 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim62Q80V85 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trim62Q80V85 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trim62Q80V85 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trim62Q80V85 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.01■□□□□ 0.15
Trim62Q80V85 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim62Q80V85 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim62Q80V85 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim62Q80V85 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim62Q80V85 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trim62Q80V85 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trim62Q80V85 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trim62Q80V85 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trim62Q80V85 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trim62Q80V85 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16■□□□□ 0.15
Trim62Q80V85 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trim62Q80V85 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trim62Q80V85 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trim62Q80V85 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trim62Q80V85 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16■□□□□ 0.15
Trim62Q80V85 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16■□□□□ 0.15
Trim62Q80V85 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16■□□□□ 0.15
Trim62Q80V85 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16■□□□□ 0.15
Trim62Q80V85 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16■□□□□ 0.15
Trim62Q80V85 Gm15590-201ENSMUST00000078419 552 ntBASIC16■□□□□ 0.15
Trim62Q80V85 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16■□□□□ 0.15
Trim62Q80V85 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trim62Q80V85 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trim62Q80V85 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trim62Q80V85 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trim62Q80V85 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trim62Q80V85 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trim62Q80V85 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim62Q80V85 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim62Q80V85 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim62Q80V85 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trim62Q80V85 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim62Q80V85 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Trim62Q80V85 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim62Q80V85 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trim62Q80V85 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trim62Q80V85 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trim62Q80V85 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Trim62Q80V85 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trim62Q80V85 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.99■□□□□ 0.15
Trim62Q80V85 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.99■□□□□ 0.15
Trim62Q80V85 Gm44771-201ENSMUST00000206975 626 ntBASIC15.99■□□□□ 0.15
Trim62Q80V85 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim62Q80V85 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim62Q80V85 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim62Q80V85 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim62Q80V85 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms