Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sned1Q70E20 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sned1Q70E20 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sned1Q70E20 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sned1Q70E20 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Sned1Q70E20 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Sned1Q70E20 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sned1Q70E20 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sned1Q70E20 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sned1Q70E20 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sned1Q70E20 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Sned1Q70E20 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sned1Q70E20 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sned1Q70E20 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Sned1Q70E20 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC18.49■□□□□ 0.55
Sned1Q70E20 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sned1Q70E20 Gm9522-201ENSMUST00000182394 926 ntBASIC18.49■□□□□ 0.55
Sned1Q70E20 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC18.49■□□□□ 0.55
Sned1Q70E20 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC18.49■□□□□ 0.55
Sned1Q70E20 Gm7556-201ENSMUST00000201178 1084 ntBASIC18.49■□□□□ 0.55
Sned1Q70E20 Gm18624-201ENSMUST00000220966 658 ntBASIC18.49■□□□□ 0.55
Sned1Q70E20 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sned1Q70E20 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sned1Q70E20 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Sned1Q70E20 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sned1Q70E20 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sned1Q70E20 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sned1Q70E20 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.48■□□□□ 0.55
Sned1Q70E20 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.48■□□□□ 0.55
Sned1Q70E20 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Sned1Q70E20 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sned1Q70E20 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sned1Q70E20 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sned1Q70E20 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sned1Q70E20 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC18.48■□□□□ 0.55
Sned1Q70E20 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sned1Q70E20 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sned1Q70E20 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sned1Q70E20 AY702102-202ENSMUST00000194651 1173 ntBASIC18.48■□□□□ 0.55
Sned1Q70E20 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sned1Q70E20 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC18.48■□□□□ 0.55
Sned1Q70E20 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sned1Q70E20 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Sned1Q70E20 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Sned1Q70E20 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sned1Q70E20 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sned1Q70E20 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sned1Q70E20 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sned1Q70E20 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sned1Q70E20 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Sned1Q70E20 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC18.47■□□□□ 0.55
Sned1Q70E20 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sned1Q70E20 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Sned1Q70E20 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC18.47■□□□□ 0.55
Sned1Q70E20 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sned1Q70E20 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Sned1Q70E20 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sned1Q70E20 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sned1Q70E20 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sned1Q70E20 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Sned1Q70E20 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sned1Q70E20 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sned1Q70E20 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sned1Q70E20 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Sned1Q70E20 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Sned1Q70E20 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Sned1Q70E20 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sned1Q70E20 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Sned1Q70E20 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC18.46■□□□□ 0.55
Sned1Q70E20 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Sned1Q70E20 Gm21854-201ENSMUST00000179901 471 ntBASIC18.46■□□□□ 0.55
Sned1Q70E20 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sned1Q70E20 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sned1Q70E20 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sned1Q70E20 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Sned1Q70E20 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sned1Q70E20 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Sned1Q70E20 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Sned1Q70E20 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Sned1Q70E20 AC164565.1-201ENSMUST00000217520 1484 ntBASIC18.45■□□□□ 0.54
Sned1Q70E20 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sned1Q70E20 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Sned1Q70E20 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Sned1Q70E20 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sned1Q70E20 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Sned1Q70E20 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sned1Q70E20 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.45■□□□□ 0.54
Sned1Q70E20 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sned1Q70E20 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sned1Q70E20 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sned1Q70E20 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sned1Q70E20 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sned1Q70E20 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC18.44■□□□□ 0.54
Sned1Q70E20 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Sned1Q70E20 Gm29310-201ENSMUST00000185468 696 ntBASIC18.44■□□□□ 0.54
Sned1Q70E20 Gm21825-201ENSMUST00000185728 696 ntBASIC18.44■□□□□ 0.54
Sned1Q70E20 Gm29109-201ENSMUST00000185895 696 ntBASIC18.44■□□□□ 0.54
Sned1Q70E20 Gm21896-201ENSMUST00000186520 696 ntBASIC18.44■□□□□ 0.54
Sned1Q70E20 Gm21873-201ENSMUST00000186728 696 ntBASIC18.44■□□□□ 0.54
Sned1Q70E20 Gm21794-201ENSMUST00000187056 696 ntBASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms