Protein–RNA interactions for Protein: Q6ZQH8

Nup188, Nucleoporin NUP188 homolog, mousemouse

Predictions only

Length 1,759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup188Q6ZQH8 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.19■□□□□ 0.5
Nup188Q6ZQH8 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nup188Q6ZQH8 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nup188Q6ZQH8 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nup188Q6ZQH8 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nup188Q6ZQH8 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC18.19■□□□□ 0.5
Nup188Q6ZQH8 AC135669.1-201ENSMUST00000213585 412 ntBASIC18.19■□□□□ 0.5
Nup188Q6ZQH8 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC18.19■□□□□ 0.5
Nup188Q6ZQH8 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nup188Q6ZQH8 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nup188Q6ZQH8 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nup188Q6ZQH8 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nup188Q6ZQH8 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nup188Q6ZQH8 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nup188Q6ZQH8 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nup188Q6ZQH8 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18.18■□□□□ 0.5
Nup188Q6ZQH8 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nup188Q6ZQH8 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nup188Q6ZQH8 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nup188Q6ZQH8 Gm16215-201ENSMUST00000161990 637 ntBASIC18.18■□□□□ 0.5
Nup188Q6ZQH8 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Nup188Q6ZQH8 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nup188Q6ZQH8 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nup188Q6ZQH8 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nup188Q6ZQH8 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nup188Q6ZQH8 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nup188Q6ZQH8 AC125350.2-201ENSMUST00000224737 727 ntBASIC18.18■□□□□ 0.5
Nup188Q6ZQH8 Gm25857-201ENSMUST00000082788 129 ntBASIC18.18■□□□□ 0.5
Nup188Q6ZQH8 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nup188Q6ZQH8 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nup188Q6ZQH8 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nup188Q6ZQH8 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nup188Q6ZQH8 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.17■□□□□ 0.5
Nup188Q6ZQH8 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Nup188Q6ZQH8 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Nup188Q6ZQH8 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC18.17■□□□□ 0.5
Nup188Q6ZQH8 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Nup188Q6ZQH8 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC18.17■□□□□ 0.5
Nup188Q6ZQH8 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Nup188Q6ZQH8 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nup188Q6ZQH8 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nup188Q6ZQH8 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nup188Q6ZQH8 Gm44344-201ENSMUST00000200287 129 ntBASIC18.17■□□□□ 0.5
Nup188Q6ZQH8 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nup188Q6ZQH8 Gm9063-201ENSMUST00000223299 582 ntBASIC18.17■□□□□ 0.5
Nup188Q6ZQH8 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nup188Q6ZQH8 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nup188Q6ZQH8 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Nup188Q6ZQH8 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nup188Q6ZQH8 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nup188Q6ZQH8 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nup188Q6ZQH8 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nup188Q6ZQH8 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC18.17■□□□□ 0.5
Nup188Q6ZQH8 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nup188Q6ZQH8 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nup188Q6ZQH8 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nup188Q6ZQH8 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nup188Q6ZQH8 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Nup188Q6ZQH8 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Nup188Q6ZQH8 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC18.17■□□□□ 0.5
Nup188Q6ZQH8 Gm9719-201ENSMUST00000162765 543 ntBASIC18.17■□□□□ 0.5
Nup188Q6ZQH8 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nup188Q6ZQH8 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nup188Q6ZQH8 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Nup188Q6ZQH8 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nup188Q6ZQH8 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC18.16■□□□□ 0.5
Nup188Q6ZQH8 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nup188Q6ZQH8 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Nup188Q6ZQH8 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC18.16■□□□□ 0.5
Nup188Q6ZQH8 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nup188Q6ZQH8 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nup188Q6ZQH8 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nup188Q6ZQH8 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nup188Q6ZQH8 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nup188Q6ZQH8 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nup188Q6ZQH8 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Nup188Q6ZQH8 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nup188Q6ZQH8 Gm18766-201ENSMUST00000189811 808 ntBASIC18.16■□□□□ 0.5
Nup188Q6ZQH8 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nup188Q6ZQH8 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nup188Q6ZQH8 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nup188Q6ZQH8 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nup188Q6ZQH8 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC18.16■□□□□ 0.5
Nup188Q6ZQH8 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nup188Q6ZQH8 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nup188Q6ZQH8 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nup188Q6ZQH8 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nup188Q6ZQH8 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nup188Q6ZQH8 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nup188Q6ZQH8 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nup188Q6ZQH8 Gm24543-201ENSMUST00000103867 82 ntBASIC18.15■□□□□ 0.5
Nup188Q6ZQH8 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC18.15■□□□□ 0.5
Nup188Q6ZQH8 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nup188Q6ZQH8 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nup188Q6ZQH8 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nup188Q6ZQH8 Gm42466-201ENSMUST00000202099 1301 ntBASIC18.15■□□□□ 0.5
Nup188Q6ZQH8 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nup188Q6ZQH8 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nup188Q6ZQH8 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.15■□□□□ 0.5
Nup188Q6ZQH8 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms