Protein–RNA interactions for Protein: Q66JQ7

Knl1, Kinetochore scaffold 1, mousemouse

Predictions only

Length 1,612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Knl1Q66JQ7 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Knl1Q66JQ7 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Knl1Q66JQ7 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC21.56■■□□□ 1.04
Knl1Q66JQ7 Ldb3-207ENSMUST00000227819 1499 ntBASIC21.55■■□□□ 1.04
Knl1Q66JQ7 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC21.55■■□□□ 1.04
Knl1Q66JQ7 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
Knl1Q66JQ7 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Knl1Q66JQ7 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Knl1Q66JQ7 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Knl1Q66JQ7 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Knl1Q66JQ7 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Knl1Q66JQ7 AC131743.5-201ENSMUST00000220775 1618 ntBASIC21.55■■□□□ 1.04
Knl1Q66JQ7 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Knl1Q66JQ7 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Knl1Q66JQ7 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Knl1Q66JQ7 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC21.55■■□□□ 1.04
Knl1Q66JQ7 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Knl1Q66JQ7 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Knl1Q66JQ7 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC21.55■■□□□ 1.04
Knl1Q66JQ7 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Knl1Q66JQ7 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Knl1Q66JQ7 Gm8602-201ENSMUST00000184045 607 ntBASIC21.55■■□□□ 1.04
Knl1Q66JQ7 Dupd1-202ENSMUST00000224735 548 ntBASIC21.55■■□□□ 1.04
Knl1Q66JQ7 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Knl1Q66JQ7 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Knl1Q66JQ7 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Knl1Q66JQ7 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Knl1Q66JQ7 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Knl1Q66JQ7 Mir1938-201ENSMUST00000158746 100 ntBASIC21.54■■□□□ 1.04
Knl1Q66JQ7 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Knl1Q66JQ7 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Knl1Q66JQ7 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Knl1Q66JQ7 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Knl1Q66JQ7 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Knl1Q66JQ7 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Knl1Q66JQ7 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Knl1Q66JQ7 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Knl1Q66JQ7 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Knl1Q66JQ7 Gm7556-201ENSMUST00000201178 1084 ntBASIC21.53■■□□□ 1.04
Knl1Q66JQ7 Gm9908-201ENSMUST00000211534 448 ntBASIC21.53■■□□□ 1.04
Knl1Q66JQ7 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC21.53■■□□□ 1.04
Knl1Q66JQ7 AC090659.2-201ENSMUST00000225378 1186 ntBASIC21.53■■□□□ 1.04
Knl1Q66JQ7 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Knl1Q66JQ7 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Knl1Q66JQ7 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Knl1Q66JQ7 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Knl1Q66JQ7 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Knl1Q66JQ7 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Knl1Q66JQ7 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Knl1Q66JQ7 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Knl1Q66JQ7 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Knl1Q66JQ7 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Knl1Q66JQ7 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Knl1Q66JQ7 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Knl1Q66JQ7 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Knl1Q66JQ7 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Knl1Q66JQ7 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Knl1Q66JQ7 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Knl1Q66JQ7 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC21.52■■□□□ 1.04
Knl1Q66JQ7 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Knl1Q66JQ7 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Knl1Q66JQ7 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Knl1Q66JQ7 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Knl1Q66JQ7 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Knl1Q66JQ7 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Knl1Q66JQ7 Gm13829-201ENSMUST00000119600 138 ntBASIC21.51■■□□□ 1.03
Knl1Q66JQ7 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC21.51■■□□□ 1.03
Knl1Q66JQ7 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Knl1Q66JQ7 Gm3436-201ENSMUST00000179930 840 ntBASIC21.51■■□□□ 1.03
Knl1Q66JQ7 Gm15823-201ENSMUST00000064305 670 ntBASIC21.51■■□□□ 1.03
Knl1Q66JQ7 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Knl1Q66JQ7 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Knl1Q66JQ7 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Knl1Q66JQ7 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Knl1Q66JQ7 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Knl1Q66JQ7 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC21.51■■□□□ 1.03
Knl1Q66JQ7 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Knl1Q66JQ7 AC153962.4-201ENSMUST00000217878 242 ntBASIC21.51■■□□□ 1.03
Knl1Q66JQ7 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
Knl1Q66JQ7 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Knl1Q66JQ7 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Knl1Q66JQ7 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Knl1Q66JQ7 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Knl1Q66JQ7 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Knl1Q66JQ7 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Knl1Q66JQ7 Gm15653-201ENSMUST00000119247 907 ntBASIC21.5■■□□□ 1.03
Knl1Q66JQ7 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC21.5■■□□□ 1.03
Knl1Q66JQ7 Gm12091-201ENSMUST00000146791 830 ntBASIC21.5■■□□□ 1.03
Knl1Q66JQ7 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Knl1Q66JQ7 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC21.5■■□□□ 1.03
Knl1Q66JQ7 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Knl1Q66JQ7 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Knl1Q66JQ7 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Knl1Q66JQ7 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Knl1Q66JQ7 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Knl1Q66JQ7 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC21.49■■□□□ 1.03
Knl1Q66JQ7 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Knl1Q66JQ7 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Knl1Q66JQ7 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Knl1Q66JQ7 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms