Protein–RNA interactions for Protein: Q64131

Runx3, Runt-related transcription factor 3, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Runx3Q64131 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Runx3Q64131 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.65■□□□□ 0.1
Runx3Q64131 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.65■□□□□ 0.1
Runx3Q64131 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.65■□□□□ 0.1
Runx3Q64131 AC158982.1-201ENSMUST00000228377 901 ntBASIC15.65■□□□□ 0.1
Runx3Q64131 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Runx3Q64131 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Runx3Q64131 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Runx3Q64131 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Runx3Q64131 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Runx3Q64131 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Runx3Q64131 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Runx3Q64131 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Runx3Q64131 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Runx3Q64131 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Runx3Q64131 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Runx3Q64131 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.1
Runx3Q64131 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Runx3Q64131 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.64■□□□□ 0.09
Runx3Q64131 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Runx3Q64131 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Runx3Q64131 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Runx3Q64131 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Runx3Q64131 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Runx3Q64131 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
Runx3Q64131 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Runx3Q64131 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Runx3Q64131 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Runx3Q64131 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.64■□□□□ 0.09
Runx3Q64131 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Runx3Q64131 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Runx3Q64131 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Runx3Q64131 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Runx3Q64131 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Runx3Q64131 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.64■□□□□ 0.09
Runx3Q64131 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Runx3Q64131 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Runx3Q64131 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Runx3Q64131 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Runx3Q64131 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Runx3Q64131 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Runx3Q64131 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Runx3Q64131 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Runx3Q64131 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Runx3Q64131 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Runx3Q64131 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Runx3Q64131 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
Runx3Q64131 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Runx3Q64131 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Runx3Q64131 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Runx3Q64131 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Runx3Q64131 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Runx3Q64131 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Runx3Q64131 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Runx3Q64131 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Runx3Q64131 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.63■□□□□ 0.09
Runx3Q64131 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Runx3Q64131 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Runx3Q64131 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.63■□□□□ 0.09
Runx3Q64131 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.63■□□□□ 0.09
Runx3Q64131 Gm43125-201ENSMUST00000201724 730 ntBASIC15.63■□□□□ 0.09
Runx3Q64131 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.63■□□□□ 0.09
Runx3Q64131 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Runx3Q64131 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.63■□□□□ 0.09
Runx3Q64131 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.63■□□□□ 0.09
Runx3Q64131 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Runx3Q64131 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Runx3Q64131 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.63■□□□□ 0.09
Runx3Q64131 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Runx3Q64131 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Runx3Q64131 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.63■□□□□ 0.09
Runx3Q64131 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Runx3Q64131 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Runx3Q64131 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Runx3Q64131 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Runx3Q64131 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Runx3Q64131 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Runx3Q64131 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Runx3Q64131 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Runx3Q64131 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Runx3Q64131 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Runx3Q64131 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.62■□□□□ 0.09
Runx3Q64131 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC15.62■□□□□ 0.09
Runx3Q64131 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Runx3Q64131 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.62■□□□□ 0.09
Runx3Q64131 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.62■□□□□ 0.09
Runx3Q64131 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Runx3Q64131 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Runx3Q64131 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Runx3Q64131 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Runx3Q64131 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Runx3Q64131 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.62■□□□□ 0.09
Runx3Q64131 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Runx3Q64131 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Runx3Q64131 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Runx3Q64131 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Runx3Q64131 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Runx3Q64131 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Runx3Q64131 AA543401-201ENSMUST00000164248 1269 ntBASIC15.61■□□□□ 0.09
Runx3Q64131 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms