Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim27Q62158 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim27Q62158 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Trim27Q62158 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.63
Trim27Q62158 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trim27Q62158 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Trim27Q62158 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trim27Q62158 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim27Q62158 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim27Q62158 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim27Q62158 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim27Q62158 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trim27Q62158 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim27Q62158 Gm9867-201ENSMUST00000192212 2647 ntBASIC19.01■□□□□ 0.63
Trim27Q62158 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trim27Q62158 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trim27Q62158 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC19.01■□□□□ 0.63
Trim27Q62158 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim27Q62158 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC19.01■□□□□ 0.63
Trim27Q62158 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim27Q62158 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim27Q62158 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
Trim27Q62158 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim27Q62158 Gm3928-201ENSMUST00000121141 1307 ntBASIC19■□□□□ 0.63
Trim27Q62158 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Trim27Q62158 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim27Q62158 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trim27Q62158 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Trim27Q62158 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim27Q62158 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trim27Q62158 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trim27Q62158 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trim27Q62158 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Trim27Q62158 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Trim27Q62158 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trim27Q62158 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trim27Q62158 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC19■□□□□ 0.63
Trim27Q62158 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim27Q62158 Gm18856-201ENSMUST00000178096 1374 ntBASIC19■□□□□ 0.63
Trim27Q62158 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Trim27Q62158 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim27Q62158 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim27Q62158 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Trim27Q62158 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC19■□□□□ 0.63
Trim27Q62158 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim27Q62158 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Trim27Q62158 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim27Q62158 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trim27Q62158 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC18.99■□□□□ 0.63
Trim27Q62158 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim27Q62158 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim27Q62158 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim27Q62158 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim27Q62158 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim27Q62158 Gm5049-201ENSMUST00000195878 1590 ntBASIC18.99■□□□□ 0.63
Trim27Q62158 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim27Q62158 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC18.99■□□□□ 0.63
Trim27Q62158 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim27Q62158 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim27Q62158 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC18.99■□□□□ 0.63
Trim27Q62158 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC18.99■□□□□ 0.63
Trim27Q62158 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim27Q62158 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim27Q62158 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim27Q62158 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim27Q62158 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim27Q62158 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim27Q62158 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim27Q62158 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim27Q62158 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim27Q62158 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim27Q62158 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim27Q62158 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trim27Q62158 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Trim27Q62158 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Trim27Q62158 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim27Q62158 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trim27Q62158 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim27Q62158 Gm7862-201ENSMUST00000121461 292 ntBASIC18.98■□□□□ 0.63
Trim27Q62158 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC18.98■□□□□ 0.63
Trim27Q62158 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
Trim27Q62158 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.98■□□□□ 0.63
Trim27Q62158 Gm37500-201ENSMUST00000192059 1443 ntBASIC18.98■□□□□ 0.63
Trim27Q62158 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
Trim27Q62158 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.97■□□□□ 0.63
Trim27Q62158 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Trim27Q62158 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim27Q62158 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim27Q62158 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
Trim27Q62158 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim27Q62158 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Trim27Q62158 Gm11452-201ENSMUST00000122376 690 ntBASIC18.97■□□□□ 0.63
Trim27Q62158 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC18.97■□□□□ 0.63
Trim27Q62158 Gm7556-201ENSMUST00000201178 1084 ntBASIC18.97■□□□□ 0.63
Trim27Q62158 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Trim27Q62158 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim27Q62158 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim27Q62158 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim27Q62158 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim27Q62158 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms