Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scnn1aQ61180 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scnn1aQ61180 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scnn1aQ61180 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scnn1aQ61180 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scnn1aQ61180 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Scnn1aQ61180 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scnn1aQ61180 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scnn1aQ61180 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC17.75■□□□□ 0.43
Scnn1aQ61180 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Scnn1aQ61180 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Scnn1aQ61180 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scnn1aQ61180 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scnn1aQ61180 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scnn1aQ61180 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scnn1aQ61180 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Scnn1aQ61180 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.75■□□□□ 0.43
Scnn1aQ61180 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scnn1aQ61180 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Scnn1aQ61180 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.74■□□□□ 0.43
Scnn1aQ61180 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scnn1aQ61180 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scnn1aQ61180 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.74■□□□□ 0.43
Scnn1aQ61180 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Scnn1aQ61180 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scnn1aQ61180 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scnn1aQ61180 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scnn1aQ61180 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.74■□□□□ 0.43
Scnn1aQ61180 Rpph1-201ENSMUST00000175096 319 ntBASIC17.74■□□□□ 0.43
Scnn1aQ61180 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC17.74■□□□□ 0.43
Scnn1aQ61180 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.74■□□□□ 0.43
Scnn1aQ61180 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scnn1aQ61180 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Scnn1aQ61180 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Scnn1aQ61180 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scnn1aQ61180 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Scnn1aQ61180 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scnn1aQ61180 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scnn1aQ61180 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Scnn1aQ61180 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Scnn1aQ61180 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scnn1aQ61180 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Scnn1aQ61180 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scnn1aQ61180 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Scnn1aQ61180 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.73■□□□□ 0.43
Scnn1aQ61180 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Scnn1aQ61180 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.73■□□□□ 0.43
Scnn1aQ61180 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC17.73■□□□□ 0.43
Scnn1aQ61180 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scnn1aQ61180 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Scnn1aQ61180 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.73■□□□□ 0.43
Scnn1aQ61180 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
Scnn1aQ61180 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scnn1aQ61180 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Scnn1aQ61180 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Scnn1aQ61180 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scnn1aQ61180 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scnn1aQ61180 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scnn1aQ61180 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.72■□□□□ 0.43
Scnn1aQ61180 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scnn1aQ61180 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scnn1aQ61180 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scnn1aQ61180 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Scnn1aQ61180 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Scnn1aQ61180 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scnn1aQ61180 Gm20553-201ENSMUST00000204205 844 ntBASIC17.72■□□□□ 0.43
Scnn1aQ61180 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Scnn1aQ61180 CT009510.1-201ENSMUST00000227972 270 ntBASIC17.72■□□□□ 0.43
Scnn1aQ61180 Gm8396-201ENSMUST00000057361 823 ntBASIC17.72■□□□□ 0.43
Scnn1aQ61180 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Scnn1aQ61180 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scnn1aQ61180 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scnn1aQ61180 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Scnn1aQ61180 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scnn1aQ61180 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scnn1aQ61180 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Scnn1aQ61180 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scnn1aQ61180 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Scnn1aQ61180 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scnn1aQ61180 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scnn1aQ61180 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scnn1aQ61180 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Scnn1aQ61180 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Scnn1aQ61180 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scnn1aQ61180 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Scnn1aQ61180 Gm9385-201ENSMUST00000117563 472 ntBASIC17.71■□□□□ 0.43
Scnn1aQ61180 Gm11745-201ENSMUST00000121669 448 ntBASIC17.71■□□□□ 0.43
Scnn1aQ61180 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Scnn1aQ61180 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.71■□□□□ 0.43
Scnn1aQ61180 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.71■□□□□ 0.43
Scnn1aQ61180 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scnn1aQ61180 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scnn1aQ61180 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scnn1aQ61180 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Scnn1aQ61180 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scnn1aQ61180 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scnn1aQ61180 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Scnn1aQ61180 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Scnn1aQ61180 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
Scnn1aQ61180 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms