Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Irf9Q61179 Gm12008-201ENSMUST00000117791 755 ntBASIC19.22■□□□□ 0.67
Irf9Q61179 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Irf9Q61179 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC19.22■□□□□ 0.67
Irf9Q61179 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Irf9Q61179 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Irf9Q61179 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Irf9Q61179 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Irf9Q61179 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Irf9Q61179 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC19.22■□□□□ 0.67
Irf9Q61179 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Irf9Q61179 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Irf9Q61179 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Irf9Q61179 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Irf9Q61179 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Irf9Q61179 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Irf9Q61179 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Irf9Q61179 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Irf9Q61179 App-207ENSMUST00000227737 2827 ntBASIC19.21■□□□□ 0.67
Irf9Q61179 AC130669.1-201ENSMUST00000228537 1672 ntBASIC19.21■□□□□ 0.67
Irf9Q61179 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Irf9Q61179 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Irf9Q61179 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Irf9Q61179 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC19.21■□□□□ 0.67
Irf9Q61179 Thap2-203ENSMUST00000218989 527 ntBASIC19.21■□□□□ 0.67
Irf9Q61179 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Irf9Q61179 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Irf9Q61179 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Irf9Q61179 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Irf9Q61179 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Irf9Q61179 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Irf9Q61179 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Irf9Q61179 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Irf9Q61179 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Irf9Q61179 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Irf9Q61179 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Irf9Q61179 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC19.2■□□□□ 0.66
Irf9Q61179 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Irf9Q61179 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Irf9Q61179 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Irf9Q61179 Gm27301-201ENSMUST00000184012 127 ntBASIC19.2■□□□□ 0.66
Irf9Q61179 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Irf9Q61179 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Irf9Q61179 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Irf9Q61179 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Irf9Q61179 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Irf9Q61179 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Irf9Q61179 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Irf9Q61179 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Irf9Q61179 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Irf9Q61179 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Irf9Q61179 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Irf9Q61179 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Irf9Q61179 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Irf9Q61179 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Irf9Q61179 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Irf9Q61179 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC19.19■□□□□ 0.66
Irf9Q61179 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Irf9Q61179 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Irf9Q61179 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Irf9Q61179 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Irf9Q61179 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Irf9Q61179 Gm15427-201ENSMUST00000117288 531 ntBASIC19.19■□□□□ 0.66
Irf9Q61179 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC19.19■□□□□ 0.66
Irf9Q61179 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Irf9Q61179 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC19.19■□□□□ 0.66
Irf9Q61179 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Irf9Q61179 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC19.19■□□□□ 0.66
Irf9Q61179 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Irf9Q61179 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Irf9Q61179 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Irf9Q61179 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Irf9Q61179 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Irf9Q61179 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Irf9Q61179 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Irf9Q61179 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC19.19■□□□□ 0.66
Irf9Q61179 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Irf9Q61179 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Irf9Q61179 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Irf9Q61179 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Irf9Q61179 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC19.18■□□□□ 0.66
Irf9Q61179 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Irf9Q61179 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.18■□□□□ 0.66
Irf9Q61179 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Irf9Q61179 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Irf9Q61179 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC19.18■□□□□ 0.66
Irf9Q61179 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Irf9Q61179 Gm7556-201ENSMUST00000201178 1084 ntBASIC19.18■□□□□ 0.66
Irf9Q61179 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Irf9Q61179 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC19.18■□□□□ 0.66
Irf9Q61179 Chchd1-203ENSMUST00000224633 557 ntBASIC19.18■□□□□ 0.66
Irf9Q61179 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC19.18■□□□□ 0.66
Irf9Q61179 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Irf9Q61179 AC025913.2-201ENSMUST00000220136 1766 ntBASIC19.18■□□□□ 0.66
Irf9Q61179 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Irf9Q61179 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Irf9Q61179 Gm45293-201ENSMUST00000209754 1812 ntBASIC19.18■□□□□ 0.66
Irf9Q61179 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Irf9Q61179 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
Irf9Q61179 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms