Protein–RNA interactions for Protein: Q61079

Sim2, Single-minded homolog 2, mousemouse

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim2Q61079 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sim2Q61079 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sim2Q61079 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC15.09■□□□□ 0.01
Sim2Q61079 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.09■□□□□ 0.01
Sim2Q61079 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC15.09■□□□□ 0.01
Sim2Q61079 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sim2Q61079 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sim2Q61079 Mir8102-201ENSMUST00000184148 139 ntBASIC15.09■□□□□ 0.01
Sim2Q61079 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sim2Q61079 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC15.09■□□□□ 0.01
Sim2Q61079 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.09■□□□□ 0.01
Sim2Q61079 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sim2Q61079 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sim2Q61079 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sim2Q61079 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sim2Q61079 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sim2Q61079 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.09■□□□□ 0.01
Sim2Q61079 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sim2Q61079 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sim2Q61079 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sim2Q61079 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sim2Q61079 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sim2Q61079 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sim2Q61079 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sim2Q61079 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sim2Q61079 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sim2Q61079 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Sim2Q61079 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sim2Q61079 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sim2Q61079 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Sim2Q61079 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sim2Q61079 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.08■□□□□ 0
Sim2Q61079 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.08■□□□□ 0
Sim2Q61079 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sim2Q61079 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC15.08■□□□□ 0
Sim2Q61079 Gm17837-201ENSMUST00000186435 985 ntBASIC15.08■□□□□ 0
Sim2Q61079 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.08■□□□□ 0
Sim2Q61079 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sim2Q61079 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sim2Q61079 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sim2Q61079 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.08■□□□□ 0
Sim2Q61079 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sim2Q61079 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sim2Q61079 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.08■□□□□ 0
Sim2Q61079 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sim2Q61079 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sim2Q61079 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sim2Q61079 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sim2Q61079 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Sim2Q61079 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sim2Q61079 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sim2Q61079 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Sim2Q61079 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Sim2Q61079 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.07■□□□□ 0
Sim2Q61079 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sim2Q61079 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sim2Q61079 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sim2Q61079 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sim2Q61079 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Sim2Q61079 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sim2Q61079 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Sim2Q61079 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sim2Q61079 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC15.07■□□□□ 0
Sim2Q61079 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sim2Q61079 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Sim2Q61079 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.07■□□□□ 0
Sim2Q61079 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.07■□□□□ 0
Sim2Q61079 Gm37277-201ENSMUST00000194052 1111 ntBASIC15.07■□□□□ 0
Sim2Q61079 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15.07■□□□□ 0
Sim2Q61079 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sim2Q61079 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Sim2Q61079 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sim2Q61079 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Sim2Q61079 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sim2Q61079 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Sim2Q61079 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.07■□□□□ 0
Sim2Q61079 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sim2Q61079 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sim2Q61079 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sim2Q61079 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sim2Q61079 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.07■□□□□ 0
Sim2Q61079 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Sim2Q61079 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Sim2Q61079 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sim2Q61079 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sim2Q61079 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Sim2Q61079 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Sim2Q61079 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Sim2Q61079 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Sim2Q61079 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Sim2Q61079 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Sim2Q61079 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sim2Q61079 Gm13223-201ENSMUST00000118609 747 ntBASIC15.06■□□□□ 0
Sim2Q61079 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.06■□□□□ 0
Sim2Q61079 Gm27989-201ENSMUST00000184721 107 ntBASIC15.06■□□□□ 0
Sim2Q61079 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC15.06■□□□□ 0
Sim2Q61079 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sim2Q61079 Gm2423-201ENSMUST00000074863 733 ntBASIC15.06■□□□□ 0
Sim2Q61079 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.06■□□□□ 0
Sim2Q61079 Gm10154-201ENSMUST00000084445 354 ntBASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms