Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usf1Q61069 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usf1Q61069 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Usf1Q61069 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usf1Q61069 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usf1Q61069 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usf1Q61069 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Usf1Q61069 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usf1Q61069 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usf1Q61069 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Usf1Q61069 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usf1Q61069 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usf1Q61069 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Usf1Q61069 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usf1Q61069 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Usf1Q61069 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.07□□□□□ -0.16
Usf1Q61069 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usf1Q61069 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.07□□□□□ -0.16
Usf1Q61069 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Usf1Q61069 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Usf1Q61069 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.07□□□□□ -0.16
Usf1Q61069 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Usf1Q61069 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.07□□□□□ -0.16
Usf1Q61069 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.07□□□□□ -0.16
Usf1Q61069 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Usf1Q61069 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.07□□□□□ -0.16
Usf1Q61069 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Usf1Q61069 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Usf1Q61069 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usf1Q61069 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Usf1Q61069 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Usf1Q61069 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usf1Q61069 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usf1Q61069 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usf1Q61069 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usf1Q61069 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usf1Q61069 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usf1Q61069 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usf1Q61069 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usf1Q61069 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usf1Q61069 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usf1Q61069 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usf1Q61069 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usf1Q61069 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.07□□□□□ -0.16
Usf1Q61069 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usf1Q61069 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usf1Q61069 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Usf1Q61069 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usf1Q61069 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usf1Q61069 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usf1Q61069 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usf1Q61069 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usf1Q61069 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usf1Q61069 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usf1Q61069 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usf1Q61069 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usf1Q61069 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.06□□□□□ -0.16
Usf1Q61069 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usf1Q61069 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usf1Q61069 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Usf1Q61069 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usf1Q61069 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usf1Q61069 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usf1Q61069 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.06□□□□□ -0.16
Usf1Q61069 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.06□□□□□ -0.16
Usf1Q61069 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usf1Q61069 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usf1Q61069 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Usf1Q61069 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usf1Q61069 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usf1Q61069 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usf1Q61069 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Usf1Q61069 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usf1Q61069 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usf1Q61069 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usf1Q61069 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usf1Q61069 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usf1Q61069 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usf1Q61069 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.05□□□□□ -0.16
Usf1Q61069 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Usf1Q61069 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Usf1Q61069 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usf1Q61069 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.05□□□□□ -0.16
Usf1Q61069 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.05□□□□□ -0.16
Usf1Q61069 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usf1Q61069 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usf1Q61069 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Usf1Q61069 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usf1Q61069 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usf1Q61069 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Usf1Q61069 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.05□□□□□ -0.16
Usf1Q61069 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usf1Q61069 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usf1Q61069 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usf1Q61069 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usf1Q61069 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usf1Q61069 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usf1Q61069 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usf1Q61069 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usf1Q61069 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms