Protein–RNA interactions for Protein: Q61060

Foxd3, Forkhead box protein D3, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd3Q61060 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxd3Q61060 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxd3Q61060 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Foxd3Q61060 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxd3Q61060 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Foxd3Q61060 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Foxd3Q61060 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxd3Q61060 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.24□□□□□ -0.13
Foxd3Q61060 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd3Q61060 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd3Q61060 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd3Q61060 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd3Q61060 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd3Q61060 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd3Q61060 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.23□□□□□ -0.13
Foxd3Q61060 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd3Q61060 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd3Q61060 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd3Q61060 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Foxd3Q61060 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd3Q61060 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.23□□□□□ -0.13
Foxd3Q61060 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.23□□□□□ -0.13
Foxd3Q61060 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.23□□□□□ -0.13
Foxd3Q61060 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd3Q61060 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.23□□□□□ -0.13
Foxd3Q61060 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd3Q61060 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.23□□□□□ -0.13
Foxd3Q61060 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd3Q61060 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd3Q61060 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd3Q61060 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd3Q61060 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd3Q61060 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd3Q61060 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd3Q61060 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Foxd3Q61060 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd3Q61060 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd3Q61060 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.23□□□□□ -0.13
Foxd3Q61060 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd3Q61060 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxd3Q61060 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxd3Q61060 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxd3Q61060 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxd3Q61060 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxd3Q61060 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxd3Q61060 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxd3Q61060 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxd3Q61060 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Foxd3Q61060 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxd3Q61060 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Foxd3Q61060 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxd3Q61060 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Foxd3Q61060 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Foxd3Q61060 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Foxd3Q61060 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Foxd3Q61060 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.22□□□□□ -0.13
Foxd3Q61060 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Foxd3Q61060 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxd3Q61060 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Foxd3Q61060 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxd3Q61060 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxd3Q61060 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.22□□□□□ -0.13
Foxd3Q61060 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxd3Q61060 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.22□□□□□ -0.13
Foxd3Q61060 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxd3Q61060 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxd3Q61060 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Foxd3Q61060 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxd3Q61060 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxd3Q61060 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxd3Q61060 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxd3Q61060 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Foxd3Q61060 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Foxd3Q61060 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Foxd3Q61060 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Foxd3Q61060 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Foxd3Q61060 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Foxd3Q61060 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Foxd3Q61060 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Foxd3Q61060 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Foxd3Q61060 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Foxd3Q61060 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Foxd3Q61060 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Foxd3Q61060 Gm13323-201ENSMUST00000120245 1151 ntBASIC14.21□□□□□ -0.13
Foxd3Q61060 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Foxd3Q61060 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Foxd3Q61060 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Foxd3Q61060 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Foxd3Q61060 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Foxd3Q61060 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Foxd3Q61060 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Foxd3Q61060 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Foxd3Q61060 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Foxd3Q61060 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Foxd3Q61060 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Foxd3Q61060 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Foxd3Q61060 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Foxd3Q61060 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Foxd3Q61060 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.21□□□□□ -0.14
Foxd3Q61060 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.21□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms