Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Scn2bQ56A07 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Scn2bQ56A07 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scn2bQ56A07 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scn2bQ56A07 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Scn2bQ56A07 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Scn2bQ56A07 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scn2bQ56A07 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scn2bQ56A07 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scn2bQ56A07 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scn2bQ56A07 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Scn2bQ56A07 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Scn2bQ56A07 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Scn2bQ56A07 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Scn2bQ56A07 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Scn2bQ56A07 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Scn2bQ56A07 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Scn2bQ56A07 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Scn2bQ56A07 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Scn2bQ56A07 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Scn2bQ56A07 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.33■□□□□ 0.04
Scn2bQ56A07 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn2bQ56A07 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn2bQ56A07 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
Scn2bQ56A07 Gm9103-201ENSMUST00000119371 405 ntBASIC15.33■□□□□ 0.04
Scn2bQ56A07 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn2bQ56A07 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Scn2bQ56A07 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.33■□□□□ 0.04
Scn2bQ56A07 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.33■□□□□ 0.04
Scn2bQ56A07 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Scn2bQ56A07 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn2bQ56A07 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.33■□□□□ 0.04
Scn2bQ56A07 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Scn2bQ56A07 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn2bQ56A07 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn2bQ56A07 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Scn2bQ56A07 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.33■□□□□ 0.04
Scn2bQ56A07 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn2bQ56A07 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Scn2bQ56A07 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn2bQ56A07 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.32■□□□□ 0.04
Scn2bQ56A07 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn2bQ56A07 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Scn2bQ56A07 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Scn2bQ56A07 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn2bQ56A07 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Scn2bQ56A07 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn2bQ56A07 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Scn2bQ56A07 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Scn2bQ56A07 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn2bQ56A07 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn2bQ56A07 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.32■□□□□ 0.04
Scn2bQ56A07 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Scn2bQ56A07 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Scn2bQ56A07 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Scn2bQ56A07 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn2bQ56A07 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Scn2bQ56A07 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Scn2bQ56A07 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn2bQ56A07 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Scn2bQ56A07 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.32■□□□□ 0.04
Scn2bQ56A07 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Scn2bQ56A07 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Scn2bQ56A07 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn2bQ56A07 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn2bQ56A07 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn2bQ56A07 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Scn2bQ56A07 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn2bQ56A07 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn2bQ56A07 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn2bQ56A07 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Scn2bQ56A07 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.31■□□□□ 0.04
Scn2bQ56A07 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.31■□□□□ 0.04
Scn2bQ56A07 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Scn2bQ56A07 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Scn2bQ56A07 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.31■□□□□ 0.04
Scn2bQ56A07 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.31■□□□□ 0.04
Scn2bQ56A07 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn2bQ56A07 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn2bQ56A07 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn2bQ56A07 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Scn2bQ56A07 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn2bQ56A07 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Scn2bQ56A07 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn2bQ56A07 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn2bQ56A07 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn2bQ56A07 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Scn2bQ56A07 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Scn2bQ56A07 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn2bQ56A07 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn2bQ56A07 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.3■□□□□ 0.04
Scn2bQ56A07 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.3■□□□□ 0.04
Scn2bQ56A07 Gm18669-201ENSMUST00000216049 778 ntBASIC15.3■□□□□ 0.04
Scn2bQ56A07 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn2bQ56A07 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn2bQ56A07 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn2bQ56A07 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn2bQ56A07 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn2bQ56A07 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn2bQ56A07 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms