Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Gm12350-201ENSMUST00000121208 462 ntBASIC17.73■□□□□ 0.43
Ckap2Q3V1H1 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ckap2Q3V1H1 Mir5131-201ENSMUST00000175426 93 ntBASIC17.73■□□□□ 0.43
Ckap2Q3V1H1 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.73■□□□□ 0.43
Ckap2Q3V1H1 AC151836.1-202ENSMUST00000226259 753 ntBASIC17.73■□□□□ 0.43
Ckap2Q3V1H1 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ckap2Q3V1H1 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Ckap2Q3V1H1 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ckap2Q3V1H1 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ckap2Q3V1H1 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ckap2Q3V1H1 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ckap2Q3V1H1 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ckap2Q3V1H1 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ckap2Q3V1H1 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ckap2Q3V1H1 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Ckap2Q3V1H1 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ckap2Q3V1H1 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ckap2Q3V1H1 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ckap2Q3V1H1 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ckap2Q3V1H1 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ckap2Q3V1H1 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ckap2Q3V1H1 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ckap2Q3V1H1 Gm13036-201ENSMUST00000117799 748 ntBASIC17.72■□□□□ 0.43
Ckap2Q3V1H1 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.72■□□□□ 0.43
Ckap2Q3V1H1 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.72■□□□□ 0.43
Ckap2Q3V1H1 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ckap2Q3V1H1 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ckap2Q3V1H1 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ckap2Q3V1H1 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ckap2Q3V1H1 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ckap2Q3V1H1 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ckap2Q3V1H1 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Ckap2Q3V1H1 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ckap2Q3V1H1 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ckap2Q3V1H1 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ckap2Q3V1H1 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ckap2Q3V1H1 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ckap2Q3V1H1 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Ckap2Q3V1H1 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Ckap2Q3V1H1 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ckap2Q3V1H1 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ckap2Q3V1H1 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ckap2Q3V1H1 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ckap2Q3V1H1 Gm11453-201ENSMUST00000117318 1007 ntBASIC17.71■□□□□ 0.43
Ckap2Q3V1H1 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ckap2Q3V1H1 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.71■□□□□ 0.43
Ckap2Q3V1H1 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ckap2Q3V1H1 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ckap2Q3V1H1 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ckap2Q3V1H1 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ckap2Q3V1H1 Gm5184-201ENSMUST00000220417 1702 ntBASIC17.71■□□□□ 0.43
Ckap2Q3V1H1 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ckap2Q3V1H1 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ckap2Q3V1H1 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Ckap2Q3V1H1 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC17.71■□□□□ 0.43
Ckap2Q3V1H1 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ckap2Q3V1H1 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.42
Ckap2Q3V1H1 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Ckap2Q3V1H1 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ckap2Q3V1H1 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ckap2Q3V1H1 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ckap2Q3V1H1 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Ckap2Q3V1H1 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ckap2Q3V1H1 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ckap2Q3V1H1 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ckap2Q3V1H1 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ckap2Q3V1H1 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Ckap2Q3V1H1 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ckap2Q3V1H1 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.7■□□□□ 0.42
Ckap2Q3V1H1 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ckap2Q3V1H1 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.7■□□□□ 0.42
Ckap2Q3V1H1 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.7■□□□□ 0.42
Ckap2Q3V1H1 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ckap2Q3V1H1 CT009510.1-201ENSMUST00000227972 270 ntBASIC17.7■□□□□ 0.42
Ckap2Q3V1H1 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Ckap2Q3V1H1 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.7■□□□□ 0.42
Ckap2Q3V1H1 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Ckap2Q3V1H1 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Ckap2Q3V1H1 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Ckap2Q3V1H1 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ckap2Q3V1H1 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Ckap2Q3V1H1 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ckap2Q3V1H1 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ckap2Q3V1H1 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ckap2Q3V1H1 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ckap2Q3V1H1 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ckap2Q3V1H1 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.69■□□□□ 0.42
Ckap2Q3V1H1 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ckap2Q3V1H1 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ckap2Q3V1H1 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ckap2Q3V1H1 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ckap2Q3V1H1 Best4-ps-201ENSMUST00000129783 1380 ntBASIC17.69■□□□□ 0.42
Ckap2Q3V1H1 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ckap2Q3V1H1 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Ckap2Q3V1H1 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ckap2Q3V1H1 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ckap2Q3V1H1 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC17.69■□□□□ 0.42
Ckap2Q3V1H1 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.69■□□□□ 0.42
Ckap2Q3V1H1 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.69■□□□□ 0.42
Ckap2Q3V1H1 Gm45167-201ENSMUST00000208007 322 ntBASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms