Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm28047Q3US59 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.64■□□□□ 0.41
Gm28047Q3US59 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Gm28047Q3US59 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm28047Q3US59 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Gm28047Q3US59 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Gm28047Q3US59 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm28047Q3US59 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm28047Q3US59 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Gm28047Q3US59 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Gm28047Q3US59 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Gm28047Q3US59 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28047Q3US59 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28047Q3US59 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28047Q3US59 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Gm28047Q3US59 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28047Q3US59 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28047Q3US59 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28047Q3US59 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.63■□□□□ 0.41
Gm28047Q3US59 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28047Q3US59 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28047Q3US59 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28047Q3US59 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28047Q3US59 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28047Q3US59 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28047Q3US59 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28047Q3US59 Gm7286-201ENSMUST00000182691 1007 ntBASIC17.63■□□□□ 0.41
Gm28047Q3US59 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28047Q3US59 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.63■□□□□ 0.41
Gm28047Q3US59 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28047Q3US59 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28047Q3US59 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28047Q3US59 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28047Q3US59 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28047Q3US59 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28047Q3US59 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Gm28047Q3US59 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC17.63■□□□□ 0.41
Gm28047Q3US59 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28047Q3US59 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.63■□□□□ 0.41
Gm28047Q3US59 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28047Q3US59 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28047Q3US59 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.62■□□□□ 0.41
Gm28047Q3US59 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28047Q3US59 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28047Q3US59 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
Gm28047Q3US59 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Gm28047Q3US59 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28047Q3US59 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28047Q3US59 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.62■□□□□ 0.41
Gm28047Q3US59 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.62■□□□□ 0.41
Gm28047Q3US59 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28047Q3US59 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.62■□□□□ 0.41
Gm28047Q3US59 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.62■□□□□ 0.41
Gm28047Q3US59 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.62■□□□□ 0.41
Gm28047Q3US59 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28047Q3US59 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28047Q3US59 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.62■□□□□ 0.41
Gm28047Q3US59 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28047Q3US59 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28047Q3US59 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.62■□□□□ 0.41
Gm28047Q3US59 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28047Q3US59 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28047Q3US59 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.62■□□□□ 0.41
Gm28047Q3US59 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28047Q3US59 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28047Q3US59 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Gm28047Q3US59 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28047Q3US59 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.62■□□□□ 0.41
Gm28047Q3US59 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28047Q3US59 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28047Q3US59 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28047Q3US59 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Gm28047Q3US59 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
Gm28047Q3US59 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28047Q3US59 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Gm28047Q3US59 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.61■□□□□ 0.41
Gm28047Q3US59 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28047Q3US59 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28047Q3US59 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28047Q3US59 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28047Q3US59 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.61■□□□□ 0.41
Gm28047Q3US59 Gm17807-201ENSMUST00000186869 298 ntBASIC17.61■□□□□ 0.41
Gm28047Q3US59 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.61■□□□□ 0.41
Gm28047Q3US59 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.61■□□□□ 0.41
Gm28047Q3US59 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28047Q3US59 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28047Q3US59 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28047Q3US59 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28047Q3US59 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28047Q3US59 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Gm28047Q3US59 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28047Q3US59 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28047Q3US59 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.61■□□□□ 0.41
Gm28047Q3US59 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28047Q3US59 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28047Q3US59 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28047Q3US59 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28047Q3US59 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Gm28047Q3US59 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Gm28047Q3US59 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms