Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Nlrc4Q3UP24 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nlrc4Q3UP24 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Nlrc4Q3UP24 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nlrc4Q3UP24 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nlrc4Q3UP24 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Nlrc4Q3UP24 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nlrc4Q3UP24 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.3■□□□□ 0.2
Nlrc4Q3UP24 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nlrc4Q3UP24 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nlrc4Q3UP24 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nlrc4Q3UP24 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nlrc4Q3UP24 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nlrc4Q3UP24 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nlrc4Q3UP24 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nlrc4Q3UP24 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Nlrc4Q3UP24 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nlrc4Q3UP24 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nlrc4Q3UP24 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Nlrc4Q3UP24 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.29■□□□□ 0.2
Nlrc4Q3UP24 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.29■□□□□ 0.2
Nlrc4Q3UP24 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nlrc4Q3UP24 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Nlrc4Q3UP24 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nlrc4Q3UP24 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.29■□□□□ 0.2
Nlrc4Q3UP24 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.29■□□□□ 0.2
Nlrc4Q3UP24 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.29■□□□□ 0.2
Nlrc4Q3UP24 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nlrc4Q3UP24 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nlrc4Q3UP24 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Nlrc4Q3UP24 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nlrc4Q3UP24 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nlrc4Q3UP24 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Nlrc4Q3UP24 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nlrc4Q3UP24 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.29■□□□□ 0.2
Nlrc4Q3UP24 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nlrc4Q3UP24 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nlrc4Q3UP24 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nlrc4Q3UP24 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nlrc4Q3UP24 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nlrc4Q3UP24 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nlrc4Q3UP24 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Nlrc4Q3UP24 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nlrc4Q3UP24 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nlrc4Q3UP24 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nlrc4Q3UP24 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nlrc4Q3UP24 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Nlrc4Q3UP24 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nlrc4Q3UP24 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Nlrc4Q3UP24 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nlrc4Q3UP24 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nlrc4Q3UP24 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nlrc4Q3UP24 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.28■□□□□ 0.2
Nlrc4Q3UP24 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nlrc4Q3UP24 Gm18489-201ENSMUST00000172565 551 ntBASIC16.28■□□□□ 0.2
Nlrc4Q3UP24 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nlrc4Q3UP24 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nlrc4Q3UP24 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Nlrc4Q3UP24 Gm8318-201ENSMUST00000182954 872 ntBASIC16.28■□□□□ 0.2
Nlrc4Q3UP24 Gm9682-201ENSMUST00000197505 556 ntBASIC16.28■□□□□ 0.2
Nlrc4Q3UP24 Gm45167-201ENSMUST00000208007 322 ntBASIC16.28■□□□□ 0.2
Nlrc4Q3UP24 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Nlrc4Q3UP24 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Nlrc4Q3UP24 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nlrc4Q3UP24 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nlrc4Q3UP24 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nlrc4Q3UP24 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Nlrc4Q3UP24 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nlrc4Q3UP24 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nlrc4Q3UP24 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.28■□□□□ 0.2
Nlrc4Q3UP24 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.28■□□□□ 0.2
Nlrc4Q3UP24 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.28■□□□□ 0.2
Nlrc4Q3UP24 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nlrc4Q3UP24 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nlrc4Q3UP24 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nlrc4Q3UP24 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nlrc4Q3UP24 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nlrc4Q3UP24 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Nlrc4Q3UP24 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nlrc4Q3UP24 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.27■□□□□ 0.2
Nlrc4Q3UP24 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.27■□□□□ 0.2
Nlrc4Q3UP24 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Nlrc4Q3UP24 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Nlrc4Q3UP24 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Nlrc4Q3UP24 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nlrc4Q3UP24 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nlrc4Q3UP24 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.27■□□□□ 0.2
Nlrc4Q3UP24 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.27■□□□□ 0.2
Nlrc4Q3UP24 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Nlrc4Q3UP24 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.27■□□□□ 0.2
Nlrc4Q3UP24 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Nlrc4Q3UP24 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nlrc4Q3UP24 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nlrc4Q3UP24 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nlrc4Q3UP24 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nlrc4Q3UP24 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nlrc4Q3UP24 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
Nlrc4Q3UP24 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Nlrc4Q3UP24 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nlrc4Q3UP24 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms