Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Brf2Q3UAW9 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Brf2Q3UAW9 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Brf2Q3UAW9 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Brf2Q3UAW9 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Brf2Q3UAW9 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Brf2Q3UAW9 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Brf2Q3UAW9 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Brf2Q3UAW9 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.61□□□□□ -0.07
Brf2Q3UAW9 Gm4459-201ENSMUST00000118750 468 ntBASIC14.61□□□□□ -0.07
Brf2Q3UAW9 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Brf2Q3UAW9 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Brf2Q3UAW9 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Brf2Q3UAW9 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.61□□□□□ -0.07
Brf2Q3UAW9 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Brf2Q3UAW9 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Brf2Q3UAW9 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Brf2Q3UAW9 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Brf2Q3UAW9 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Brf2Q3UAW9 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Brf2Q3UAW9 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.6□□□□□ -0.07
Brf2Q3UAW9 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Brf2Q3UAW9 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Brf2Q3UAW9 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Brf2Q3UAW9 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Brf2Q3UAW9 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Brf2Q3UAW9 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Brf2Q3UAW9 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Brf2Q3UAW9 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.6□□□□□ -0.07
Brf2Q3UAW9 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Brf2Q3UAW9 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Brf2Q3UAW9 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Brf2Q3UAW9 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Brf2Q3UAW9 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Brf2Q3UAW9 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.6□□□□□ -0.07
Brf2Q3UAW9 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Brf2Q3UAW9 Gm7506-201ENSMUST00000207758 815 ntBASIC14.6□□□□□ -0.07
Brf2Q3UAW9 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.6□□□□□ -0.07
Brf2Q3UAW9 Gm19164-201ENSMUST00000210667 640 ntBASIC14.6□□□□□ -0.07
Brf2Q3UAW9 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.6□□□□□ -0.07
Brf2Q3UAW9 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Brf2Q3UAW9 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Brf2Q3UAW9 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Brf2Q3UAW9 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Brf2Q3UAW9 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Brf2Q3UAW9 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.6□□□□□ -0.07
Brf2Q3UAW9 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.6□□□□□ -0.07
Brf2Q3UAW9 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.6□□□□□ -0.07
Brf2Q3UAW9 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Brf2Q3UAW9 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brf2Q3UAW9 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Brf2Q3UAW9 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brf2Q3UAW9 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.59□□□□□ -0.07
Brf2Q3UAW9 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brf2Q3UAW9 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Brf2Q3UAW9 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Brf2Q3UAW9 Gm8344-201ENSMUST00000119813 856 ntBASIC14.59□□□□□ -0.07
Brf2Q3UAW9 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.59□□□□□ -0.07
Brf2Q3UAW9 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Brf2Q3UAW9 Gm18622-201ENSMUST00000219361 595 ntBASIC14.59□□□□□ -0.07
Brf2Q3UAW9 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brf2Q3UAW9 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brf2Q3UAW9 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brf2Q3UAW9 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brf2Q3UAW9 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Brf2Q3UAW9 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Brf2Q3UAW9 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brf2Q3UAW9 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Brf2Q3UAW9 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brf2Q3UAW9 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Brf2Q3UAW9 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Brf2Q3UAW9 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brf2Q3UAW9 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Brf2Q3UAW9 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Brf2Q3UAW9 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Brf2Q3UAW9 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Brf2Q3UAW9 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Brf2Q3UAW9 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Brf2Q3UAW9 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Brf2Q3UAW9 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Brf2Q3UAW9 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Brf2Q3UAW9 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Brf2Q3UAW9 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Brf2Q3UAW9 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
Brf2Q3UAW9 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.58□□□□□ -0.08
Brf2Q3UAW9 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Brf2Q3UAW9 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Brf2Q3UAW9 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Brf2Q3UAW9 Gm12644-201ENSMUST00000119935 606 ntBASIC14.58□□□□□ -0.08
Brf2Q3UAW9 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.58□□□□□ -0.08
Brf2Q3UAW9 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Brf2Q3UAW9 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.58□□□□□ -0.08
Brf2Q3UAW9 Gm18669-201ENSMUST00000216049 778 ntBASIC14.58□□□□□ -0.08
Brf2Q3UAW9 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.58□□□□□ -0.08
Brf2Q3UAW9 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Brf2Q3UAW9 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Brf2Q3UAW9 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Brf2Q3UAW9 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Brf2Q3UAW9 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Brf2Q3UAW9 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms