Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
GabpaQ00422 Gm20553-201ENSMUST00000204205 844 ntBASIC17.54■□□□□ 0.4
GabpaQ00422 AC155252.2-201ENSMUST00000226946 680 ntBASIC17.54■□□□□ 0.4
GabpaQ00422 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GabpaQ00422 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GabpaQ00422 Gm8396-201ENSMUST00000057361 823 ntBASIC17.54■□□□□ 0.4
GabpaQ00422 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GabpaQ00422 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC17.54■□□□□ 0.4
GabpaQ00422 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.54■□□□□ 0.4
GabpaQ00422 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
GabpaQ00422 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GabpaQ00422 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
GabpaQ00422 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GabpaQ00422 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GabpaQ00422 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
GabpaQ00422 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
GabpaQ00422 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GabpaQ00422 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GabpaQ00422 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GabpaQ00422 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GabpaQ00422 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
GabpaQ00422 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
GabpaQ00422 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GabpaQ00422 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GabpaQ00422 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
GabpaQ00422 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.53■□□□□ 0.4
GabpaQ00422 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
GabpaQ00422 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GabpaQ00422 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GabpaQ00422 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
GabpaQ00422 Gm12008-201ENSMUST00000117791 755 ntBASIC17.53■□□□□ 0.4
GabpaQ00422 Mir1895-201ENSMUST00000122615 79 ntBASIC17.53■□□□□ 0.4
GabpaQ00422 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.53■□□□□ 0.4
GabpaQ00422 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
GabpaQ00422 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GabpaQ00422 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GabpaQ00422 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GabpaQ00422 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GabpaQ00422 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
GabpaQ00422 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.53■□□□□ 0.4
GabpaQ00422 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GabpaQ00422 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.53■□□□□ 0.4
GabpaQ00422 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
GabpaQ00422 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.53■□□□□ 0.4
GabpaQ00422 Gm7901-201ENSMUST00000120430 1597 ntBASIC17.53■□□□□ 0.4
GabpaQ00422 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GabpaQ00422 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.52■□□□□ 0.4
GabpaQ00422 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
GabpaQ00422 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GabpaQ00422 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GabpaQ00422 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GabpaQ00422 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.52■□□□□ 0.4
GabpaQ00422 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
GabpaQ00422 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.52■□□□□ 0.4
GabpaQ00422 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GabpaQ00422 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
GabpaQ00422 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GabpaQ00422 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
GabpaQ00422 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
GabpaQ00422 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
GabpaQ00422 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
GabpaQ00422 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
GabpaQ00422 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.52■□□□□ 0.39
GabpaQ00422 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
GabpaQ00422 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GabpaQ00422 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
GabpaQ00422 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
GabpaQ00422 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
GabpaQ00422 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.51■□□□□ 0.39
GabpaQ00422 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GabpaQ00422 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GabpaQ00422 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
GabpaQ00422 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
GabpaQ00422 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
GabpaQ00422 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
GabpaQ00422 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
GabpaQ00422 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GabpaQ00422 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
GabpaQ00422 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GabpaQ00422 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GabpaQ00422 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.51■□□□□ 0.39
GabpaQ00422 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
GabpaQ00422 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GabpaQ00422 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GabpaQ00422 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.51■□□□□ 0.39
GabpaQ00422 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GabpaQ00422 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GabpaQ00422 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
GabpaQ00422 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
GabpaQ00422 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.51■□□□□ 0.39
GabpaQ00422 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
GabpaQ00422 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GabpaQ00422 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.5■□□□□ 0.39
GabpaQ00422 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
GabpaQ00422 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GabpaQ00422 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
GabpaQ00422 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GabpaQ00422 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
GabpaQ00422 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC17.5■□□□□ 0.39
GabpaQ00422 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms