Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcc1P97496 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcc1P97496 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcc1P97496 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcc1P97496 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC19.32■□□□□ 0.68
Smarcc1P97496 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcc1P97496 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcc1P97496 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcc1P97496 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcc1P97496 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.32■□□□□ 0.68
Smarcc1P97496 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcc1P97496 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Smarcc1P97496 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcc1P97496 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcc1P97496 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcc1P97496 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcc1P97496 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcc1P97496 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.31■□□□□ 0.68
Smarcc1P97496 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC19.31■□□□□ 0.68
Smarcc1P97496 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcc1P97496 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcc1P97496 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcc1P97496 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC19.31■□□□□ 0.68
Smarcc1P97496 Gm27618-201ENSMUST00000183671 60 ntBASIC19.31■□□□□ 0.68
Smarcc1P97496 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcc1P97496 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcc1P97496 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcc1P97496 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Smarcc1P97496 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcc1P97496 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Smarcc1P97496 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Smarcc1P97496 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Smarcc1P97496 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcc1P97496 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC19.31■□□□□ 0.68
Smarcc1P97496 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcc1P97496 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcc1P97496 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcc1P97496 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcc1P97496 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcc1P97496 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Smarcc1P97496 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcc1P97496 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcc1P97496 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Smarcc1P97496 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Smarcc1P97496 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcc1P97496 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcc1P97496 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Smarcc1P97496 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcc1P97496 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Smarcc1P97496 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Smarcc1P97496 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Smarcc1P97496 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Smarcc1P97496 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcc1P97496 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarcc1P97496 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarcc1P97496 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Smarcc1P97496 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smarcc1P97496 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC19.29■□□□□ 0.68
Smarcc1P97496 Gm15693-201ENSMUST00000120470 637 ntBASIC19.29■□□□□ 0.68
Smarcc1P97496 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Smarcc1P97496 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smarcc1P97496 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC19.29■□□□□ 0.68
Smarcc1P97496 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC19.29■□□□□ 0.68
Smarcc1P97496 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC19.29■□□□□ 0.68
Smarcc1P97496 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarcc1P97496 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarcc1P97496 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarcc1P97496 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC19.29■□□□□ 0.68
Smarcc1P97496 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarcc1P97496 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarcc1P97496 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarcc1P97496 Prkcz2-201ENSMUST00000206136 1756 ntBASIC19.29■□□□□ 0.68
Smarcc1P97496 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarcc1P97496 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarcc1P97496 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarcc1P97496 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC19.28■□□□□ 0.68
Smarcc1P97496 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcc1P97496 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcc1P97496 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcc1P97496 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC19.28■□□□□ 0.68
Smarcc1P97496 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Smarcc1P97496 Gm6415-201ENSMUST00000118488 348 ntBASIC19.28■□□□□ 0.68
Smarcc1P97496 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC19.28■□□□□ 0.68
Smarcc1P97496 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Smarcc1P97496 Gm17837-201ENSMUST00000186435 985 ntBASIC19.28■□□□□ 0.68
Smarcc1P97496 Gm38294-201ENSMUST00000192831 381 ntBASIC19.28■□□□□ 0.68
Smarcc1P97496 AC160980.1-201ENSMUST00000224136 970 ntBASIC19.28■□□□□ 0.68
Smarcc1P97496 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcc1P97496 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcc1P97496 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcc1P97496 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcc1P97496 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Smarcc1P97496 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Smarcc1P97496 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcc1P97496 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcc1P97496 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcc1P97496 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcc1P97496 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smarcc1P97496 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smarcc1P97496 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms