Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nub1P54729 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Nub1P54729 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nub1P54729 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Nub1P54729 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nub1P54729 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nub1P54729 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nub1P54729 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Nub1P54729 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nub1P54729 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nub1P54729 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nub1P54729 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nub1P54729 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nub1P54729 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.66■□□□□ 0.26
Nub1P54729 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nub1P54729 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
Nub1P54729 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nub1P54729 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nub1P54729 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nub1P54729 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nub1P54729 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nub1P54729 Gm13884-201ENSMUST00000118103 829 ntBASIC16.66■□□□□ 0.26
Nub1P54729 Gm8344-201ENSMUST00000119813 856 ntBASIC16.66■□□□□ 0.26
Nub1P54729 Mir8098-201ENSMUST00000184011 137 ntBASIC16.66■□□□□ 0.26
Nub1P54729 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nub1P54729 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nub1P54729 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nub1P54729 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nub1P54729 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nub1P54729 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nub1P54729 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nub1P54729 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nub1P54729 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nub1P54729 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nub1P54729 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nub1P54729 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nub1P54729 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nub1P54729 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nub1P54729 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nub1P54729 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nub1P54729 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Nub1P54729 Gm25990-201ENSMUST00000102440 86 ntBASIC16.65■□□□□ 0.26
Nub1P54729 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.65■□□□□ 0.26
Nub1P54729 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.65■□□□□ 0.26
Nub1P54729 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.65■□□□□ 0.26
Nub1P54729 Gm27646-201ENSMUST00000183989 110 ntBASIC16.65■□□□□ 0.26
Nub1P54729 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nub1P54729 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Nub1P54729 Gm19164-201ENSMUST00000210667 640 ntBASIC16.65■□□□□ 0.26
Nub1P54729 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.65■□□□□ 0.26
Nub1P54729 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.65■□□□□ 0.26
Nub1P54729 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.65■□□□□ 0.26
Nub1P54729 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nub1P54729 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nub1P54729 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Nub1P54729 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nub1P54729 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nub1P54729 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nub1P54729 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nub1P54729 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nub1P54729 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nub1P54729 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nub1P54729 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nub1P54729 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nub1P54729 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Nub1P54729 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.64■□□□□ 0.26
Nub1P54729 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nub1P54729 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nub1P54729 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nub1P54729 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nub1P54729 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nub1P54729 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nub1P54729 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.64■□□□□ 0.25
Nub1P54729 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.64■□□□□ 0.25
Nub1P54729 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nub1P54729 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.64■□□□□ 0.25
Nub1P54729 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nub1P54729 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.64■□□□□ 0.25
Nub1P54729 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.64■□□□□ 0.25
Nub1P54729 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nub1P54729 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nub1P54729 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Nub1P54729 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nub1P54729 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nub1P54729 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nub1P54729 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nub1P54729 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nub1P54729 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nub1P54729 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nub1P54729 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nub1P54729 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.63■□□□□ 0.25
Nub1P54729 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nub1P54729 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nub1P54729 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nub1P54729 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Nub1P54729 Gm7862-201ENSMUST00000121461 292 ntBASIC16.63■□□□□ 0.25
Nub1P54729 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.63■□□□□ 0.25
Nub1P54729 Gm28659-201ENSMUST00000188013 759 ntBASIC16.63■□□□□ 0.25
Nub1P54729 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.63■□□□□ 0.25
Nub1P54729 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms