Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
Lhx3P50481 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lhx3P50481 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.67■□□□□ 0.1
Lhx3P50481 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.67■□□□□ 0.1
Lhx3P50481 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.67■□□□□ 0.1
Lhx3P50481 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Lhx3P50481 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
Lhx3P50481 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lhx3P50481 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lhx3P50481 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lhx3P50481 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lhx3P50481 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lhx3P50481 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Lhx3P50481 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lhx3P50481 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lhx3P50481 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Lhx3P50481 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lhx3P50481 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.67■□□□□ 0.1
Lhx3P50481 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.67■□□□□ 0.1
Lhx3P50481 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lhx3P50481 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx3P50481 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Lhx3P50481 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx3P50481 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx3P50481 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx3P50481 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx3P50481 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx3P50481 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx3P50481 Gm11779-201ENSMUST00000118541 368 ntBASIC15.66■□□□□ 0.1
Lhx3P50481 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx3P50481 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Lhx3P50481 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.66■□□□□ 0.1
Lhx3P50481 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.66■□□□□ 0.1
Lhx3P50481 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
Lhx3P50481 Gm9727-201ENSMUST00000161387 555 ntBASIC15.66■□□□□ 0.1
Lhx3P50481 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.66■□□□□ 0.1
Lhx3P50481 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx3P50481 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx3P50481 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.66■□□□□ 0.1
Lhx3P50481 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx3P50481 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx3P50481 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx3P50481 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx3P50481 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Lhx3P50481 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx3P50481 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.66■□□□□ 0.1
Lhx3P50481 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.66■□□□□ 0.1
Lhx3P50481 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Lhx3P50481 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx3P50481 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.66■□□□□ 0.1
Lhx3P50481 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Lhx3P50481 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Lhx3P50481 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx3P50481 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx3P50481 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx3P50481 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx3P50481 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.65■□□□□ 0.1
Lhx3P50481 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx3P50481 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Lhx3P50481 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Lhx3P50481 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx3P50481 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.65■□□□□ 0.1
Lhx3P50481 Gm13597-201ENSMUST00000121239 375 ntBASIC15.65■□□□□ 0.1
Lhx3P50481 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx3P50481 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.65■□□□□ 0.1
Lhx3P50481 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.65■□□□□ 0.1
Lhx3P50481 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.65■□□□□ 0.1
Lhx3P50481 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Lhx3P50481 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Lhx3P50481 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx3P50481 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx3P50481 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx3P50481 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx3P50481 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.65■□□□□ 0.1
Lhx3P50481 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx3P50481 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx3P50481 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx3P50481 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx3P50481 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx3P50481 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx3P50481 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx3P50481 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx3P50481 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.64■□□□□ 0.09
Lhx3P50481 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx3P50481 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx3P50481 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.64■□□□□ 0.09
Lhx3P50481 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Lhx3P50481 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx3P50481 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx3P50481 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx3P50481 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx3P50481 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx3P50481 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx3P50481 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx3P50481 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15.64■□□□□ 0.09
Lhx3P50481 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.64■□□□□ 0.09
Lhx3P50481 Gm18246-201ENSMUST00000221023 728 ntBASIC15.64■□□□□ 0.09
Lhx3P50481 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx3P50481 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx3P50481 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms