Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm5264-201ENSMUST00000190584 848 ntBASIC16.36■□□□□ 0.21
Shmt1P50431 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.36■□□□□ 0.21
Shmt1P50431 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shmt1P50431 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shmt1P50431 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shmt1P50431 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shmt1P50431 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shmt1P50431 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shmt1P50431 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shmt1P50431 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shmt1P50431 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shmt1P50431 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shmt1P50431 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Shmt1P50431 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shmt1P50431 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shmt1P50431 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.36■□□□□ 0.21
Shmt1P50431 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Shmt1P50431 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shmt1P50431 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shmt1P50431 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Shmt1P50431 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Shmt1P50431 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shmt1P50431 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Shmt1P50431 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shmt1P50431 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shmt1P50431 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shmt1P50431 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shmt1P50431 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.35■□□□□ 0.21
Shmt1P50431 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.35■□□□□ 0.21
Shmt1P50431 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.35■□□□□ 0.21
Shmt1P50431 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shmt1P50431 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shmt1P50431 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shmt1P50431 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shmt1P50431 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shmt1P50431 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Shmt1P50431 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shmt1P50431 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shmt1P50431 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.34■□□□□ 0.21
Shmt1P50431 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.34■□□□□ 0.21
Shmt1P50431 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shmt1P50431 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shmt1P50431 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Shmt1P50431 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Shmt1P50431 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shmt1P50431 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shmt1P50431 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shmt1P50431 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Shmt1P50431 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shmt1P50431 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Shmt1P50431 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Shmt1P50431 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Shmt1P50431 Gm14722-201ENSMUST00000118943 689 ntBASIC16.34■□□□□ 0.21
Shmt1P50431 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Shmt1P50431 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.34■□□□□ 0.21
Shmt1P50431 Gm8318-201ENSMUST00000182954 872 ntBASIC16.34■□□□□ 0.21
Shmt1P50431 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.34■□□□□ 0.21
Shmt1P50431 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.34■□□□□ 0.21
Shmt1P50431 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Shmt1P50431 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Shmt1P50431 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shmt1P50431 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.34■□□□□ 0.21
Shmt1P50431 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Shmt1P50431 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shmt1P50431 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shmt1P50431 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shmt1P50431 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Shmt1P50431 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shmt1P50431 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shmt1P50431 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shmt1P50431 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shmt1P50431 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
Shmt1P50431 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shmt1P50431 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shmt1P50431 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shmt1P50431 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Shmt1P50431 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shmt1P50431 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Shmt1P50431 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shmt1P50431 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shmt1P50431 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Shmt1P50431 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.33■□□□□ 0.21
Shmt1P50431 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Shmt1P50431 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.33■□□□□ 0.21
Shmt1P50431 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Shmt1P50431 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shmt1P50431 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shmt1P50431 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Shmt1P50431 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Shmt1P50431 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shmt1P50431 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shmt1P50431 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Shmt1P50431 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shmt1P50431 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shmt1P50431 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shmt1P50431 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.33■□□□□ 0.2
Shmt1P50431 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shmt1P50431 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Shmt1P50431 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shmt1P50431 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms