Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GdnfP48540 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GdnfP48540 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.61□□□□□ -0.23
GdnfP48540 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
GdnfP48540 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
GdnfP48540 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
GdnfP48540 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
GdnfP48540 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GdnfP48540 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
GdnfP48540 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
GdnfP48540 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GdnfP48540 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GdnfP48540 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GdnfP48540 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC13.61□□□□□ -0.23
GdnfP48540 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
GdnfP48540 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
GdnfP48540 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC13.61□□□□□ -0.23
GdnfP48540 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13.61□□□□□ -0.23
GdnfP48540 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GdnfP48540 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GdnfP48540 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GdnfP48540 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GdnfP48540 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
GdnfP48540 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC13.61□□□□□ -0.23
GdnfP48540 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GdnfP48540 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GdnfP48540 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
GdnfP48540 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GdnfP48540 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GdnfP48540 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
GdnfP48540 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GdnfP48540 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
GdnfP48540 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
GdnfP48540 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
GdnfP48540 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
GdnfP48540 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GdnfP48540 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
GdnfP48540 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GdnfP48540 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GdnfP48540 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GdnfP48540 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GdnfP48540 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GdnfP48540 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GdnfP48540 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GdnfP48540 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
GdnfP48540 Gm15442-201ENSMUST00000117905 1527 ntBASIC13.6□□□□□ -0.23
GdnfP48540 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.6□□□□□ -0.23
GdnfP48540 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GdnfP48540 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.6□□□□□ -0.23
GdnfP48540 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
GdnfP48540 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GdnfP48540 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
GdnfP48540 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.6□□□□□ -0.23
GdnfP48540 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GdnfP48540 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.6□□□□□ -0.23
GdnfP48540 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GdnfP48540 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC13.6□□□□□ -0.23
GdnfP48540 Gm5587-201ENSMUST00000206270 674 ntBASIC13.6□□□□□ -0.23
GdnfP48540 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GdnfP48540 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GdnfP48540 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
GdnfP48540 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GdnfP48540 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
GdnfP48540 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GdnfP48540 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GdnfP48540 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
GdnfP48540 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GdnfP48540 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
GdnfP48540 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
GdnfP48540 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GdnfP48540 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GdnfP48540 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GdnfP48540 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC13.59□□□□□ -0.23
GdnfP48540 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
GdnfP48540 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GdnfP48540 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
GdnfP48540 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GdnfP48540 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
GdnfP48540 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GdnfP48540 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
GdnfP48540 AA414768-201ENSMUST00000121924 1257 ntBASIC13.59□□□□□ -0.23
GdnfP48540 Gm9013-201ENSMUST00000132939 882 ntBASIC13.59□□□□□ -0.23
GdnfP48540 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GdnfP48540 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
GdnfP48540 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GdnfP48540 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
GdnfP48540 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GdnfP48540 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GdnfP48540 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GdnfP48540 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GdnfP48540 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
GdnfP48540 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GdnfP48540 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
GdnfP48540 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
GdnfP48540 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GdnfP48540 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
GdnfP48540 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GdnfP48540 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GdnfP48540 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
GdnfP48540 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms