Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.65□□□□□ -0.06
Nkx2-6P43688 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-6P43688 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-6P43688 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Nkx2-6P43688 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-6P43688 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-6P43688 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-6P43688 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.65□□□□□ -0.06
Nkx2-6P43688 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.65□□□□□ -0.06
Nkx2-6P43688 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Nkx2-6P43688 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-6P43688 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.64□□□□□ -0.07
Nkx2-6P43688 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-6P43688 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-6P43688 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-6P43688 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Nkx2-6P43688 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Nkx2-6P43688 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-6P43688 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-6P43688 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-6P43688 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-6P43688 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.64□□□□□ -0.07
Nkx2-6P43688 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-6P43688 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-6P43688 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Nkx2-6P43688 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-6P43688 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-6P43688 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Nkx2-6P43688 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Nkx2-6P43688 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-6P43688 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-6P43688 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Nkx2-6P43688 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-6P43688 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-6P43688 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-6P43688 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-6P43688 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-6P43688 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-6P43688 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-6P43688 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-6P43688 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-6P43688 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-6P43688 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-6P43688 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-6P43688 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-6P43688 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Nkx2-6P43688 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-6P43688 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.63□□□□□ -0.07
Nkx2-6P43688 Gm26308-201ENSMUST00000157768 69 ntBASIC14.63□□□□□ -0.07
Nkx2-6P43688 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Nkx2-6P43688 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-6P43688 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Nkx2-6P43688 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.63□□□□□ -0.07
Nkx2-6P43688 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-6P43688 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-6P43688 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-6P43688 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-6P43688 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Nkx2-6P43688 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-6P43688 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-6P43688 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-6P43688 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-6P43688 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-6P43688 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Nkx2-6P43688 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-6P43688 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-6P43688 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-6P43688 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-6P43688 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Nkx2-6P43688 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-6P43688 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-6P43688 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-6P43688 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.62□□□□□ -0.07
Nkx2-6P43688 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-6P43688 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.62□□□□□ -0.07
Nkx2-6P43688 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-6P43688 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-6P43688 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-6P43688 Chchd1-203ENSMUST00000224633 557 ntBASIC14.62□□□□□ -0.07
Nkx2-6P43688 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-6P43688 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.62□□□□□ -0.07
Nkx2-6P43688 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-6P43688 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.62□□□□□ -0.07
Nkx2-6P43688 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-6P43688 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Nkx2-6P43688 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.62□□□□□ -0.07
Nkx2-6P43688 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.62□□□□□ -0.07
Nkx2-6P43688 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-6P43688 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-6P43688 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-6P43688 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-6P43688 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Nkx2-6P43688 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.62□□□□□ -0.07
Nkx2-6P43688 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.62□□□□□ -0.07
Nkx2-6P43688 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-6P43688 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-6P43688 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-6P43688 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-6P43688 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-6P43688 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms