Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HttP42859 Gm24543-201ENSMUST00000103867 82 ntBASIC16.34■□□□□ 0.21
HttP42859 Gm37917-201ENSMUST00000194711 392 ntBASIC16.34■□□□□ 0.21
HttP42859 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HttP42859 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.34■□□□□ 0.21
HttP42859 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
HttP42859 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
HttP42859 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HttP42859 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HttP42859 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HttP42859 Gm45841-201ENSMUST00000207700 164 ntBASIC16.33■□□□□ 0.21
HttP42859 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HttP42859 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HttP42859 Gm3786-201ENSMUST00000202659 378 ntBASIC16.33■□□□□ 0.2
HttP42859 CT485787.1-201ENSMUST00000225617 968 ntBASIC16.33■□□□□ 0.2
HttP42859 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HttP42859 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HttP42859 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HttP42859 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.32■□□□□ 0.2
HttP42859 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC16.32■□□□□ 0.2
HttP42859 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC16.32■□□□□ 0.2
HttP42859 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.32■□□□□ 0.2
HttP42859 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HttP42859 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HttP42859 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HttP42859 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HttP42859 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HttP42859 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HttP42859 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HttP42859 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HttP42859 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC16.32■□□□□ 0.2
HttP42859 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HttP42859 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HttP42859 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HttP42859 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HttP42859 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HttP42859 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HttP42859 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HttP42859 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.32■□□□□ 0.2
HttP42859 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC16.32■□□□□ 0.2
HttP42859 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HttP42859 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HttP42859 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
HttP42859 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HttP42859 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HttP42859 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HttP42859 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HttP42859 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HttP42859 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HttP42859 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HttP42859 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HttP42859 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HttP42859 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HttP42859 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC16.31■□□□□ 0.2
HttP42859 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HttP42859 AC090659.2-201ENSMUST00000225378 1186 ntBASIC16.31■□□□□ 0.2
HttP42859 AC238811.3-201ENSMUST00000225422 709 ntBASIC16.31■□□□□ 0.2
HttP42859 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HttP42859 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HttP42859 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HttP42859 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC16.31■□□□□ 0.2
HttP42859 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC16.31■□□□□ 0.2
HttP42859 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC16.31■□□□□ 0.2
HttP42859 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC16.31■□□□□ 0.2
HttP42859 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
HttP42859 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC16.31■□□□□ 0.2
HttP42859 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC16.31■□□□□ 0.2
HttP42859 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HttP42859 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HttP42859 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HttP42859 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HttP42859 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HttP42859 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC16.3■□□□□ 0.2
HttP42859 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HttP42859 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HttP42859 Gm3436-201ENSMUST00000179930 840 ntBASIC16.3■□□□□ 0.2
HttP42859 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
HttP42859 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HttP42859 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.3■□□□□ 0.2
HttP42859 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.3■□□□□ 0.2
HttP42859 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HttP42859 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HttP42859 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HttP42859 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HttP42859 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HttP42859 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC16.3■□□□□ 0.2
HttP42859 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HttP42859 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HttP42859 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HttP42859 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HttP42859 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.3■□□□□ 0.2
HttP42859 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
HttP42859 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HttP42859 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HttP42859 Gm12742-201ENSMUST00000117326 410 ntBASIC16.3■□□□□ 0.2
HttP42859 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HttP42859 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
HttP42859 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HttP42859 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HttP42859 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms