Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox6P40645 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox6P40645 Gm44430-201ENSMUST00000203376 995 ntBASIC14.58□□□□□ -0.08
Sox6P40645 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.58□□□□□ -0.08
Sox6P40645 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.58□□□□□ -0.08
Sox6P40645 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.58□□□□□ -0.08
Sox6P40645 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox6P40645 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox6P40645 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox6P40645 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sox6P40645 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.08
Sox6P40645 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox6P40645 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.58□□□□□ -0.08
Sox6P40645 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.58□□□□□ -0.08
Sox6P40645 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Sox6P40645 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox6P40645 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
Sox6P40645 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Sox6P40645 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox6P40645 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox6P40645 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox6P40645 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox6P40645 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox6P40645 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox6P40645 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox6P40645 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox6P40645 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox6P40645 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Sox6P40645 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox6P40645 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox6P40645 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox6P40645 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.57□□□□□ -0.08
Sox6P40645 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox6P40645 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox6P40645 Gm7284-201ENSMUST00000131667 944 ntBASIC14.57□□□□□ -0.08
Sox6P40645 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sox6P40645 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.57□□□□□ -0.08
Sox6P40645 Gm27704-201ENSMUST00000185094 107 ntBASIC14.57□□□□□ -0.08
Sox6P40645 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox6P40645 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox6P40645 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox6P40645 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
Sox6P40645 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sox6P40645 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Sox6P40645 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sox6P40645 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.57□□□□□ -0.08
Sox6P40645 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.57□□□□□ -0.08
Sox6P40645 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox6P40645 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox6P40645 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox6P40645 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox6P40645 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
Sox6P40645 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox6P40645 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Sox6P40645 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox6P40645 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox6P40645 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox6P40645 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox6P40645 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox6P40645 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.56□□□□□ -0.08
Sox6P40645 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Sox6P40645 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox6P40645 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox6P40645 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox6P40645 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Sox6P40645 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Sox6P40645 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox6P40645 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Sox6P40645 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox6P40645 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sox6P40645 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC14.56□□□□□ -0.08
Sox6P40645 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Sox6P40645 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox6P40645 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox6P40645 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox6P40645 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox6P40645 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox6P40645 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Sox6P40645 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.56□□□□□ -0.08
Sox6P40645 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox6P40645 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox6P40645 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox6P40645 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox6P40645 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Sox6P40645 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox6P40645 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sox6P40645 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox6P40645 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Sox6P40645 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox6P40645 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox6P40645 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Sox6P40645 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox6P40645 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.55□□□□□ -0.08
Sox6P40645 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox6P40645 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox6P40645 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox6P40645 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sox6P40645 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sox6P40645 Gm36967-201ENSMUST00000193814 266 ntBASIC14.55□□□□□ -0.08
Sox6P40645 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms