Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a1P31648 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC13.37□□□□□ -0.27
Slc6a1P31648 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a1P31648 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a1P31648 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a1P31648 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a1P31648 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a1P31648 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a1P31648 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a1P31648 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a1P31648 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a1P31648 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.37□□□□□ -0.27
Slc6a1P31648 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a1P31648 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.37□□□□□ -0.27
Slc6a1P31648 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a1P31648 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a1P31648 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a1P31648 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Slc6a1P31648 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a1P31648 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a1P31648 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a1P31648 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.36□□□□□ -0.27
Slc6a1P31648 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a1P31648 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Slc6a1P31648 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a1P31648 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.36□□□□□ -0.27
Slc6a1P31648 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Slc6a1P31648 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a1P31648 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a1P31648 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a1P31648 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Slc6a1P31648 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a1P31648 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Slc6a1P31648 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.36□□□□□ -0.27
Slc6a1P31648 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Slc6a1P31648 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a1P31648 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a1P31648 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a1P31648 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a1P31648 Gm10013-201ENSMUST00000106074 672 ntBASIC13.36□□□□□ -0.27
Slc6a1P31648 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a1P31648 Gm36967-201ENSMUST00000193814 266 ntBASIC13.36□□□□□ -0.27
Slc6a1P31648 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Slc6a1P31648 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a1P31648 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Slc6a1P31648 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Slc6a1P31648 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a1P31648 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Slc6a1P31648 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.36□□□□□ -0.27
Slc6a1P31648 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a1P31648 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a1P31648 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a1P31648 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a1P31648 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a1P31648 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a1P31648 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a1P31648 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a1P31648 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a1P31648 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a1P31648 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a1P31648 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc6a1P31648 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc6a1P31648 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.35□□□□□ -0.27
Slc6a1P31648 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc6a1P31648 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc6a1P31648 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc6a1P31648 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc6a1P31648 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.35□□□□□ -0.27
Slc6a1P31648 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc6a1P31648 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc6a1P31648 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc6a1P31648 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc6a1P31648 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.35□□□□□ -0.27
Slc6a1P31648 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Slc6a1P31648 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc6a1P31648 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc6a1P31648 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Slc6a1P31648 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Slc6a1P31648 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC13.35□□□□□ -0.27
Slc6a1P31648 AC134329.2-201ENSMUST00000217897 428 ntBASIC13.35□□□□□ -0.27
Slc6a1P31648 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Slc6a1P31648 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Slc6a1P31648 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc6a1P31648 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc6a1P31648 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc6a1P31648 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Slc6a1P31648 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc6a1P31648 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc6a1P31648 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.35□□□□□ -0.27
Slc6a1P31648 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Slc6a1P31648 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc6a1P31648 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc6a1P31648 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Slc6a1P31648 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Slc6a1P31648 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc6a1P31648 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Slc6a1P31648 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Slc6a1P31648 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Slc6a1P31648 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Slc6a1P31648 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms