Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Cd40lgP27548 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cd40lgP27548 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd40lgP27548 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cd40lgP27548 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd40lgP27548 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd40lgP27548 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd40lgP27548 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cd40lgP27548 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd40lgP27548 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd40lgP27548 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd40lgP27548 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.28□□□□□ -0.12
Cd40lgP27548 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cd40lgP27548 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cd40lgP27548 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cd40lgP27548 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cd40lgP27548 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cd40lgP27548 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cd40lgP27548 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Cd40lgP27548 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.27□□□□□ -0.12
Cd40lgP27548 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.27□□□□□ -0.12
Cd40lgP27548 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cd40lgP27548 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Cd40lgP27548 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cd40lgP27548 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cd40lgP27548 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cd40lgP27548 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Cd40lgP27548 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cd40lgP27548 Gm8655-201ENSMUST00000221159 852 ntBASIC14.27□□□□□ -0.13
Cd40lgP27548 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cd40lgP27548 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cd40lgP27548 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cd40lgP27548 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cd40lgP27548 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Cd40lgP27548 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cd40lgP27548 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cd40lgP27548 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cd40lgP27548 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Cd40lgP27548 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cd40lgP27548 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cd40lgP27548 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cd40lgP27548 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cd40lgP27548 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cd40lgP27548 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cd40lgP27548 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Cd40lgP27548 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cd40lgP27548 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cd40lgP27548 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cd40lgP27548 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cd40lgP27548 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.26□□□□□ -0.13
Cd40lgP27548 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cd40lgP27548 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cd40lgP27548 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.26□□□□□ -0.13
Cd40lgP27548 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cd40lgP27548 Gm7506-201ENSMUST00000207758 815 ntBASIC14.26□□□□□ -0.13
Cd40lgP27548 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.26□□□□□ -0.13
Cd40lgP27548 Mzt1-203ENSMUST00000227948 952 ntBASIC14.26□□□□□ -0.13
Cd40lgP27548 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cd40lgP27548 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.26□□□□□ -0.13
Cd40lgP27548 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cd40lgP27548 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cd40lgP27548 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cd40lgP27548 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cd40lgP27548 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cd40lgP27548 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cd40lgP27548 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cd40lgP27548 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cd40lgP27548 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Cd40lgP27548 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cd40lgP27548 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cd40lgP27548 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cd40lgP27548 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cd40lgP27548 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cd40lgP27548 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cd40lgP27548 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cd40lgP27548 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Cd40lgP27548 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cd40lgP27548 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Cd40lgP27548 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cd40lgP27548 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cd40lgP27548 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cd40lgP27548 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Cd40lgP27548 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cd40lgP27548 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cd40lgP27548 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cd40lgP27548 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cd40lgP27548 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cd40lgP27548 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.25□□□□□ -0.13
Cd40lgP27548 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.25□□□□□ -0.13
Cd40lgP27548 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.25□□□□□ -0.13
Cd40lgP27548 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cd40lgP27548 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cd40lgP27548 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cd40lgP27548 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cd40lgP27548 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cd40lgP27548 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cd40lgP27548 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cd40lgP27548 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cd40lgP27548 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cd40lgP27548 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms