Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pde6bP23440 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pde6bP23440 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pde6bP23440 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pde6bP23440 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pde6bP23440 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Pde6bP23440 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pde6bP23440 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pde6bP23440 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pde6bP23440 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pde6bP23440 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pde6bP23440 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pde6bP23440 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pde6bP23440 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.9■□□□□ 0.3
Pde6bP23440 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pde6bP23440 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pde6bP23440 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.9■□□□□ 0.3
Pde6bP23440 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pde6bP23440 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Pde6bP23440 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pde6bP23440 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pde6bP23440 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pde6bP23440 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pde6bP23440 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.9■□□□□ 0.3
Pde6bP23440 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pde6bP23440 Gm4899-201ENSMUST00000178708 719 ntBASIC16.9■□□□□ 0.3
Pde6bP23440 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pde6bP23440 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pde6bP23440 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pde6bP23440 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pde6bP23440 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Pde6bP23440 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pde6bP23440 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pde6bP23440 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Pde6bP23440 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.89■□□□□ 0.3
Pde6bP23440 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Pde6bP23440 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
Pde6bP23440 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pde6bP23440 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Pde6bP23440 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pde6bP23440 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pde6bP23440 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pde6bP23440 Gm6257-201ENSMUST00000163864 910 ntBASIC16.89■□□□□ 0.29
Pde6bP23440 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Pde6bP23440 Gm27300-201ENSMUST00000184085 97 ntBASIC16.89■□□□□ 0.29
Pde6bP23440 Gm27335-201ENSMUST00000184758 97 ntBASIC16.89■□□□□ 0.29
Pde6bP23440 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.89■□□□□ 0.29
Pde6bP23440 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.89■□□□□ 0.29
Pde6bP23440 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Pde6bP23440 Gm19164-201ENSMUST00000210667 640 ntBASIC16.89■□□□□ 0.29
Pde6bP23440 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.89■□□□□ 0.29
Pde6bP23440 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pde6bP23440 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pde6bP23440 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pde6bP23440 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Pde6bP23440 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pde6bP23440 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pde6bP23440 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pde6bP23440 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pde6bP23440 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pde6bP23440 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pde6bP23440 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pde6bP23440 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pde6bP23440 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pde6bP23440 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pde6bP23440 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pde6bP23440 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pde6bP23440 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pde6bP23440 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pde6bP23440 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Pde6bP23440 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.88■□□□□ 0.29
Pde6bP23440 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pde6bP23440 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pde6bP23440 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC16.88■□□□□ 0.29
Pde6bP23440 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.88■□□□□ 0.29
Pde6bP23440 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pde6bP23440 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.88■□□□□ 0.29
Pde6bP23440 Gm17271-201ENSMUST00000165535 355 ntBASIC16.88■□□□□ 0.29
Pde6bP23440 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pde6bP23440 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pde6bP23440 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pde6bP23440 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pde6bP23440 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pde6bP23440 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pde6bP23440 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pde6bP23440 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pde6bP23440 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC16.87■□□□□ 0.29
Pde6bP23440 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pde6bP23440 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
Pde6bP23440 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Pde6bP23440 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pde6bP23440 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pde6bP23440 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pde6bP23440 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pde6bP23440 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pde6bP23440 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC16.87■□□□□ 0.29
Pde6bP23440 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pde6bP23440 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pde6bP23440 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.87■□□□□ 0.29
Pde6bP23440 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms