Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cxcl1P12850 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.84□□□□□ -0.35
Cxcl1P12850 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cxcl1P12850 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cxcl1P12850 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.84□□□□□ -0.35
Cxcl1P12850 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Cxcl1P12850 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Cxcl1P12850 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.84□□□□□ -0.35
Cxcl1P12850 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cxcl1P12850 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Cxcl1P12850 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Cxcl1P12850 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl1P12850 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl1P12850 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl1P12850 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl1P12850 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Cxcl1P12850 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl1P12850 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.83□□□□□ -0.36
Cxcl1P12850 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl1P12850 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl1P12850 Gm8668-201ENSMUST00000120559 1447 ntBASIC12.83□□□□□ -0.36
Cxcl1P12850 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Cxcl1P12850 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl1P12850 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.83□□□□□ -0.36
Cxcl1P12850 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl1P12850 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.83□□□□□ -0.36
Cxcl1P12850 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl1P12850 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl1P12850 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl1P12850 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl1P12850 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl1P12850 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl1P12850 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl1P12850 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl1P12850 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl1P12850 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl1P12850 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl1P12850 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl1P12850 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl1P12850 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl1P12850 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl1P12850 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Cxcl1P12850 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl1P12850 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl1P12850 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl1P12850 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cxcl1P12850 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.82□□□□□ -0.36
Cxcl1P12850 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cxcl1P12850 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cxcl1P12850 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cxcl1P12850 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Cxcl1P12850 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cxcl1P12850 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Cxcl1P12850 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.82□□□□□ -0.36
Cxcl1P12850 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cxcl1P12850 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.82□□□□□ -0.36
Cxcl1P12850 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cxcl1P12850 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cxcl1P12850 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
Cxcl1P12850 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cxcl1P12850 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cxcl1P12850 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cxcl1P12850 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cxcl1P12850 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cxcl1P12850 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cxcl1P12850 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cxcl1P12850 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cxcl1P12850 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cxcl1P12850 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cxcl1P12850 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cxcl1P12850 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cxcl1P12850 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cxcl1P12850 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cxcl1P12850 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cxcl1P12850 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cxcl1P12850 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cxcl1P12850 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cxcl1P12850 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cxcl1P12850 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cxcl1P12850 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cxcl1P12850 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cxcl1P12850 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cxcl1P12850 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Cxcl1P12850 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cxcl1P12850 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.81□□□□□ -0.36
Cxcl1P12850 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC12.81□□□□□ -0.36
Cxcl1P12850 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cxcl1P12850 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cxcl1P12850 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cxcl1P12850 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.81□□□□□ -0.36
Cxcl1P12850 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12.81□□□□□ -0.36
Cxcl1P12850 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cxcl1P12850 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cxcl1P12850 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.81□□□□□ -0.36
Cxcl1P12850 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cxcl1P12850 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cxcl1P12850 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cxcl1P12850 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cxcl1P12850 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cxcl1P12850 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms